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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.7
nTPM
Monaco:
24.4
nTPM
Schmiedel:
77.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.7
HPA sample
nTPM
gdT-cell nTPM: 37.0
Samples: 6
Max nTPM: 46.7
Min nTPM: 24.6
P10809_1007
45.9
P10809_1022
42.6
P10809_1041
46.7
P10809_1060
26.9
P10809_1077
24.6
P10809_1098
35.0
MAIT T-cell nTPM: 45.3
Samples: 6
Max nTPM: 64.6
Min nTPM: 15.3
P10809_1006
41.0
P10809_1024
49.1
P10809_1043
64.6
P10809_1062
50.1
P10809_1083
15.3
P10809_1097
51.7
Memory CD4 T-cell nTPM: 51.7
Samples: 6
Max nTPM: 63.0
Min nTPM: 45.6
P10809_1014
45.6
P10809_1026
63.0
P10809_1045
50.7
P10809_1064
47.3
P10809_1086
51.1
P10809_1113
52.7
Memory CD8 T-cell nTPM: 33.8
Samples: 5
Max nTPM: 45.3
Min nTPM: 3.4
P10809_1012
35.9
P10809_1027
45.3
P10809_1046
43.1
P10809_1065
41.1
P10809_1111
3.4
Naive CD4 T-cell nTPM: 45.8
Samples: 6
Max nTPM: 52.1
Min nTPM: 36.0
P10809_1015
45.1
P10809_1030
47.2
P10809_1049
52.1
P10809_1068
44.0
P10809_1085
50.4
P10809_1112
36.0
Naive CD8 T-cell nTPM: 30.2
Samples: 6
Max nTPM: 40.1
Min nTPM: 16.2
P10809_1016
32.6
P10809_1031
25.3
P10809_1050
40.1
P10809_1069
16.2
P10809_1087
38.7
P10809_1110
28.2
T-reg nTPM: 30.0
Samples: 6
Max nTPM: 79.5
Min nTPM: 1.6
P10809_1018
28.6
P10809_1037
34.3
P10809_1056
19.2
P10809_1075
1.6
P10809_1094
17.0
P10809_1106
79.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 16.5
Min nTPM: 0.0
RHH5202_R3573
0.0
RHH5230_R3602
16.5
RHH5259_R3631
13.5
RHH5288_R3660
16.3
Effector memory CD8 T-cell nTPM: 5.3
Samples: 4
Max nTPM: 17.6
Min nTPM: 0.0
RHH5203_R3574
0.0
RHH5231_R3603
1.6
RHH5260_R3632
2.1
RHH5289_R3661
17.6
MAIT T-cell nTPM: 18.7
Samples: 4
Max nTPM: 30.7
Min nTPM: 9.5
RHH5233_R3605
18.8
RHH5205_R3576
15.9
RHH5262_R3634
30.7
RHH5297_R3663
9.5
Memory CD4 T-cell TFH nTPM: 20.6
Samples: 4
Max nTPM: 36.1
Min nTPM: 8.8
RHH5300_R3666
8.8
RHH5236_R3608
36.1
RHH5265_R3637
26.3
RHH5208_R3579
11.2
Memory CD4 T-cell Th1 nTPM: 16.0
Samples: 4
Max nTPM: 28.2
Min nTPM: 0.0
RHH5210_R3581
10.5
RHH5302_R3668
25.1
RHH5238_R3610
28.2
RHH5267_R3639
0.0
Memory CD4 T-cell Th1/Th17 nTPM: 13.2
Samples: 4
Max nTPM: 24.6
Min nTPM: 2.5
RHH5303_R3669
2.5
RHH5211_R3582
20.2
RHH5239_R3611
5.4
RHH5268_R3640
24.6
Memory CD4 T-cell Th17 nTPM: 20.8
Samples: 4
Max nTPM: 30.6
Min nTPM: 12.8
RHH5304_R3670
30.6
RHH5212_R3583
24.4
RHH5240_R3612
12.8
RHH5269_R3641
15.4
Memory CD4 T-cell Th2 nTPM: 10.0
Samples: 4
Max nTPM: 20.2
Min nTPM: 0.0
RHH5305_R3671
15.4
RHH5213_R3584
4.2
RHH5241_R3613
0.0
RHH5270_R3642
20.2
Naive CD4 T-cell nTPM: 0.1
Samples: 4
Max nTPM: 0.3
Min nTPM: 0.0
RHH5306_R3672
0.0
RHH5214_R3585
0.0
RHH5242_R3614
0.3
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 8.3
Samples: 4
Max nTPM: 24.7
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
8.3
RHH5287_R3659
24.7
Non-Vd2 gdTCR nTPM: 8.0
Samples: 4
Max nTPM: 21.1
Min nTPM: 0.0
RHH5235_R3607
21.1
RHH5264_R3636
0.8
RHH5207_R3578
9.9
RHH5299_R3665
0.0
T-reg nTPM: 23.6
Samples: 4
Max nTPM: 36.2
Min nTPM: 16.1
RHH5301_R3667
36.2
RHH5237_R3609
16.1
RHH5266_R3638
20.1
RHH5209_R3580
22.1
Terminal effector memory CD4 T-cell nTPM: 17.0
Samples: 2
Max nTPM: 19.0
Min nTPM: 15.0
RHH5243_R3615
19.0
RHH5272_R3644
15.0
Terminal effector memory CD8 T-cell nTPM: 14.7
Samples: 4
Max nTPM: 23.8
Min nTPM: 0.1
RHH5232_R3604
22.1
RHH5204_R3575
0.1
RHH5261_R3633
12.9
RHH5296_R3662
23.8
Vd2 gdTCR nTPM: 24.5
Samples: 4
Max nTPM: 51.2
Min nTPM: 11.5
RHH5234_R3606
11.5
RHH5206_R3577
17.5
RHH5263_R3635
17.6
RHH5298_R3664
51.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
