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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
113.8
nTPM
Monaco:
47.3
nTPM
Schmiedel:
51.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.8
HPA sample
nTPM
gdT-cell nTPM: 80.3
Samples: 6
Max nTPM: 139.6
Min nTPM: 16.5
P10809_1007
16.5
P10809_1022
110.1
P10809_1041
139.6
P10809_1060
74.7
P10809_1077
68.5
P10809_1098
72.6
MAIT T-cell nTPM: 80.7
Samples: 6
Max nTPM: 128.1
Min nTPM: 6.4
P10809_1006
6.4
P10809_1024
102.6
P10809_1043
122.0
P10809_1062
71.3
P10809_1083
53.8
P10809_1097
128.1
Memory CD4 T-cell nTPM: 82.0
Samples: 6
Max nTPM: 119.8
Min nTPM: 11.9
P10809_1014
11.9
P10809_1026
119.8
P10809_1045
117.6
P10809_1064
93.4
P10809_1086
63.0
P10809_1113
86.0
Memory CD8 T-cell nTPM: 85.2
Samples: 5
Max nTPM: 130.4
Min nTPM: 9.9
P10809_1012
9.9
P10809_1027
115.5
P10809_1046
130.4
P10809_1065
75.7
P10809_1111
94.4
Naive CD4 T-cell nTPM: 71.7
Samples: 6
Max nTPM: 108.7
Min nTPM: 2.6
P10809_1015
2.6
P10809_1030
97.9
P10809_1049
108.7
P10809_1068
74.8
P10809_1085
68.0
P10809_1112
77.9
Naive CD8 T-cell nTPM: 62.1
Samples: 6
Max nTPM: 86.0
Min nTPM: 11.1
P10809_1016
11.1
P10809_1031
83.3
P10809_1050
86.0
P10809_1069
67.9
P10809_1087
61.4
P10809_1110
63.0
T-reg nTPM: 113.8
Samples: 6
Max nTPM: 155.7
Min nTPM: 17.4
P10809_1018
17.4
P10809_1037
141.9
P10809_1056
155.7
P10809_1075
141.2
P10809_1094
110.2
P10809_1106
116.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 30.1
Samples: 4
Max nTPM: 89.6
Min nTPM: 0.0
RHH5202_R3573
0.0
RHH5230_R3602
1.4
RHH5259_R3631
29.5
RHH5288_R3660
89.6
Effector memory CD8 T-cell nTPM: 23.0
Samples: 4
Max nTPM: 44.4
Min nTPM: 0.0
RHH5203_R3574
0.0
RHH5231_R3603
5.3
RHH5260_R3632
42.4
RHH5289_R3661
44.4
MAIT T-cell nTPM: 36.9
Samples: 4
Max nTPM: 84.0
Min nTPM: 0.0
RHH5233_R3605
4.4
RHH5205_R3576
0.0
RHH5262_R3634
59.0
RHH5297_R3663
84.0
Memory CD4 T-cell TFH nTPM: 38.2
Samples: 4
Max nTPM: 91.4
Min nTPM: 0.0
RHH5300_R3666
91.4
RHH5236_R3608
0.0
RHH5265_R3637
61.2
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 43.8
Samples: 4
Max nTPM: 116.3
Min nTPM: 1.3
RHH5210_R3581
1.3
RHH5302_R3668
116.3
RHH5238_R3610
9.5
RHH5267_R3639
48.2
Memory CD4 T-cell Th1/Th17 nTPM: 34.9
Samples: 4
Max nTPM: 111.8
Min nTPM: 0.0
RHH5303_R3669
111.8
RHH5211_R3582
0.0
RHH5239_R3611
0.8
RHH5268_R3640
26.8
Memory CD4 T-cell Th17 nTPM: 21.8
Samples: 4
Max nTPM: 47.3
Min nTPM: 0.0
RHH5304_R3670
39.7
RHH5212_R3583
0.0
RHH5240_R3612
0.0
RHH5269_R3641
47.3
Memory CD4 T-cell Th2 nTPM: 31.7
Samples: 4
Max nTPM: 78.4
Min nTPM: 0.0
RHH5305_R3671
78.4
RHH5213_R3584
0.0
RHH5241_R3613
10.7
RHH5270_R3642
37.6
Naive CD4 T-cell nTPM: 25.0
Samples: 4
Max nTPM: 60.8
Min nTPM: 0.0
RHH5306_R3672
60.8
RHH5214_R3585
0.0
RHH5242_R3614
10.1
RHH5271_R3643
29.0
Naive CD8 T-cell nTPM: 25.9
Samples: 4
Max nTPM: 59.2
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
1.5
RHH5258_R3630
59.2
RHH5287_R3659
43.0
Non-Vd2 gdTCR nTPM: 45.2
Samples: 4
Max nTPM: 98.6
Min nTPM: 0.0
RHH5235_R3607
0.5
RHH5264_R3636
81.5
RHH5207_R3578
0.0
RHH5299_R3665
98.6
T-reg nTPM: 36.9
Samples: 4
Max nTPM: 97.6
Min nTPM: 0.0
RHH5301_R3667
97.6
RHH5237_R3609
16.5
RHH5266_R3638
33.6
RHH5209_R3580
0.0
Terminal effector memory CD4 T-cell nTPM: 33.3
Samples: 2
Max nTPM: 66.2
Min nTPM: 0.4
RHH5243_R3615
0.4
RHH5272_R3644
66.2
Terminal effector memory CD8 T-cell nTPM: 47.3
Samples: 4
Max nTPM: 124.6
Min nTPM: 0.0
RHH5232_R3604
2.0
RHH5204_R3575
0.0
RHH5261_R3633
62.6
RHH5296_R3662
124.6
Vd2 gdTCR nTPM: 43.2
Samples: 4
Max nTPM: 125.8
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
0.0
RHH5263_R3635
47.0
RHH5298_R3664
125.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
