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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.9
nTPM
Monaco:
27.5
nTPM
Schmiedel:
25.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.9
HPA sample
nTPM
gdT-cell nTPM: 9.4
Samples: 6
Max nTPM: 15.6
Min nTPM: 5.0
P10809_1007
7.8
P10809_1022
11.7
P10809_1041
15.6
P10809_1060
10.2
P10809_1077
5.0
P10809_1098
6.2
MAIT T-cell nTPM: 81.0
Samples: 6
Max nTPM: 107.8
Min nTPM: 48.3
P10809_1006
65.4
P10809_1024
74.7
P10809_1043
107.8
P10809_1062
107.6
P10809_1083
81.9
P10809_1097
48.3
Memory CD4 T-cell nTPM: 16.0
Samples: 6
Max nTPM: 18.6
Min nTPM: 11.6
P10809_1014
18.5
P10809_1026
18.6
P10809_1045
18.2
P10809_1064
11.6
P10809_1086
15.0
P10809_1113
14.0
Memory CD8 T-cell nTPM: 20.3
Samples: 5
Max nTPM: 30.3
Min nTPM: 7.1
P10809_1012
23.5
P10809_1027
7.1
P10809_1046
30.3
P10809_1065
25.5
P10809_1111
14.9
Naive CD4 T-cell nTPM: 11.0
Samples: 6
Max nTPM: 17.9
Min nTPM: 3.8
P10809_1015
3.8
P10809_1030
10.5
P10809_1049
17.9
P10809_1068
11.7
P10809_1085
11.9
P10809_1112
10.1
Naive CD8 T-cell nTPM: 9.1
Samples: 6
Max nTPM: 17.6
Min nTPM: 6.2
P10809_1016
7.4
P10809_1031
17.6
P10809_1050
7.7
P10809_1069
7.6
P10809_1087
7.9
P10809_1110
6.2
T-reg nTPM: 12.1
Samples: 6
Max nTPM: 19.2
Min nTPM: 5.3
P10809_1018
5.3
P10809_1037
10.0
P10809_1056
18.4
P10809_1075
6.0
P10809_1094
13.4
P10809_1106
19.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 7.5
Samples: 4
Max nTPM: 15.6
Min nTPM: 0.8
RHH5202_R3573
15.6
RHH5230_R3602
7.7
RHH5259_R3631
0.8
RHH5288_R3660
5.8
Effector memory CD8 T-cell nTPM: 5.2
Samples: 4
Max nTPM: 11.3
Min nTPM: 1.3
RHH5203_R3574
6.8
RHH5231_R3603
11.3
RHH5260_R3632
1.3
RHH5289_R3661
1.5
MAIT T-cell nTPM: 27.5
Samples: 4
Max nTPM: 35.8
Min nTPM: 19.1
RHH5233_R3605
26.4
RHH5205_R3576
19.1
RHH5262_R3634
28.6
RHH5297_R3663
35.8
Memory CD4 T-cell TFH nTPM: 11.5
Samples: 4
Max nTPM: 26.9
Min nTPM: 3.7
RHH5300_R3666
3.7
RHH5236_R3608
26.9
RHH5265_R3637
5.2
RHH5208_R3579
10.1
Memory CD4 T-cell Th1 nTPM: 6.6
Samples: 4
Max nTPM: 10.7
Min nTPM: 1.1
RHH5210_R3581
5.9
RHH5302_R3668
1.1
RHH5238_R3610
10.7
RHH5267_R3639
8.5
Memory CD4 T-cell Th1/Th17 nTPM: 11.1
Samples: 4
Max nTPM: 15.5
Min nTPM: 7.4
RHH5303_R3669
7.4
RHH5211_R3582
15.5
RHH5239_R3611
8.2
RHH5268_R3640
13.1
Memory CD4 T-cell Th17 nTPM: 12.9
Samples: 4
Max nTPM: 23.7
Min nTPM: 5.2
RHH5304_R3670
15.5
RHH5212_R3583
7.0
RHH5240_R3612
23.7
RHH5269_R3641
5.2
Memory CD4 T-cell Th2 nTPM: 8.3
Samples: 4
Max nTPM: 15.4
Min nTPM: 2.1
RHH5305_R3671
7.1
RHH5213_R3584
8.7
RHH5241_R3613
15.4
RHH5270_R3642
2.1
Naive CD4 T-cell nTPM: 3.4
Samples: 4
Max nTPM: 7.6
Min nTPM: 0.6
RHH5306_R3672
7.6
RHH5214_R3585
3.1
RHH5242_R3614
0.6
RHH5271_R3643
2.1
Naive CD8 T-cell nTPM: 3.0
Samples: 4
Max nTPM: 4.7
Min nTPM: 0.6
RHH5201_R3572
0.6
RHH5229_R3601
4.7
RHH5258_R3630
2.3
RHH5287_R3659
4.2
Non-Vd2 gdTCR nTPM: 2.5
Samples: 4
Max nTPM: 4.7
Min nTPM: 1.1
RHH5235_R3607
2.5
RHH5264_R3636
1.1
RHH5207_R3578
1.6
RHH5299_R3665
4.7
T-reg nTPM: 5.2
Samples: 4
Max nTPM: 8.0
Min nTPM: 1.8
RHH5301_R3667
1.8
RHH5237_R3609
5.5
RHH5266_R3638
8.0
RHH5209_R3580
5.6
Terminal effector memory CD4 T-cell nTPM: 5.3
Samples: 2
Max nTPM: 6.4
Min nTPM: 4.2
RHH5243_R3615
4.2
RHH5272_R3644
6.4
Terminal effector memory CD8 T-cell nTPM: 6.1
Samples: 4
Max nTPM: 10.8
Min nTPM: 1.2
RHH5232_R3604
7.1
RHH5204_R3575
10.8
RHH5261_R3633
5.1
RHH5296_R3662
1.2
Vd2 gdTCR nTPM: 7.4
Samples: 4
Max nTPM: 11.0
Min nTPM: 2.2
RHH5234_R3606
11.0
RHH5206_R3577
2.2
RHH5263_R3635
6.7
RHH5298_R3664
9.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
