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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
130.0
nTPM
Monaco:
144.0
nTPM
Schmiedel:
105.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.0
HPA sample
nTPM
gdT-cell nTPM: 77.2
Samples: 6
Max nTPM: 104.3
Min nTPM: 61.7
P10809_1007
61.7
P10809_1022
104.3
P10809_1041
69.4
P10809_1060
72.1
P10809_1077
68.7
P10809_1098
87.2
MAIT T-cell nTPM: 105.0
Samples: 6
Max nTPM: 142.9
Min nTPM: 82.4
P10809_1006
82.4
P10809_1024
142.9
P10809_1043
95.0
P10809_1062
111.2
P10809_1083
114.1
P10809_1097
84.1
Memory CD4 T-cell nTPM: 104.6
Samples: 6
Max nTPM: 141.7
Min nTPM: 88.5
P10809_1014
93.5
P10809_1026
141.7
P10809_1045
99.0
P10809_1064
88.5
P10809_1086
101.3
P10809_1113
103.8
Memory CD8 T-cell nTPM: 86.3
Samples: 5
Max nTPM: 97.3
Min nTPM: 65.3
P10809_1012
65.3
P10809_1027
97.3
P10809_1046
82.8
P10809_1065
92.3
P10809_1111
93.8
Naive CD4 T-cell nTPM: 130.0
Samples: 6
Max nTPM: 160.6
Min nTPM: 93.7
P10809_1015
93.7
P10809_1030
143.8
P10809_1049
160.6
P10809_1068
132.7
P10809_1085
124.9
P10809_1112
124.5
Naive CD8 T-cell nTPM: 103.9
Samples: 6
Max nTPM: 125.2
Min nTPM: 80.7
P10809_1016
100.0
P10809_1031
125.2
P10809_1050
103.1
P10809_1069
104.8
P10809_1087
80.7
P10809_1110
109.5
T-reg nTPM: 108.3
Samples: 6
Max nTPM: 127.5
Min nTPM: 83.6
P10809_1018
83.6
P10809_1037
123.5
P10809_1056
127.5
P10809_1075
86.5
P10809_1094
117.7
P10809_1106
111.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.9
Samples: 4
Max nTPM: 103.8
Min nTPM: 47.7
RHH5202_R3573
86.4
RHH5230_R3602
47.7
RHH5259_R3631
65.6
RHH5288_R3660
103.8
Effector memory CD8 T-cell nTPM: 84.7
Samples: 4
Max nTPM: 98.6
Min nTPM: 68.3
RHH5203_R3574
89.4
RHH5231_R3603
82.3
RHH5260_R3632
68.3
RHH5289_R3661
98.6
MAIT T-cell nTPM: 86.3
Samples: 4
Max nTPM: 112.8
Min nTPM: 49.3
RHH5233_R3605
77.7
RHH5205_R3576
49.3
RHH5262_R3634
105.2
RHH5297_R3663
112.8
Memory CD4 T-cell TFH nTPM: 114.0
Samples: 4
Max nTPM: 125.3
Min nTPM: 106.7
RHH5300_R3666
125.3
RHH5236_R3608
116.1
RHH5265_R3637
107.9
RHH5208_R3579
106.7
Memory CD4 T-cell Th1 nTPM: 94.6
Samples: 4
Max nTPM: 137.2
Min nTPM: 47.1
RHH5210_R3581
105.8
RHH5302_R3668
137.2
RHH5238_R3610
47.1
RHH5267_R3639
88.3
Memory CD4 T-cell Th1/Th17 nTPM: 108.1
Samples: 4
Max nTPM: 166.1
Min nTPM: 39.7
RHH5303_R3669
166.1
RHH5211_R3582
127.9
RHH5239_R3611
39.7
RHH5268_R3640
98.5
Memory CD4 T-cell Th17 nTPM: 93.1
Samples: 4
Max nTPM: 144.1
Min nTPM: 44.8
RHH5304_R3670
107.1
RHH5212_R3583
144.1
RHH5240_R3612
44.8
RHH5269_R3641
76.3
Memory CD4 T-cell Th2 nTPM: 144.0
Samples: 4
Max nTPM: 169.4
Min nTPM: 112.8
RHH5305_R3671
169.4
RHH5213_R3584
161.5
RHH5241_R3613
112.8
RHH5270_R3642
132.2
Naive CD4 T-cell nTPM: 137.8
Samples: 4
Max nTPM: 163.4
Min nTPM: 110.0
RHH5306_R3672
160.5
RHH5214_R3585
163.4
RHH5242_R3614
110.0
RHH5271_R3643
117.2
Naive CD8 T-cell nTPM: 98.3
Samples: 4
Max nTPM: 152.9
Min nTPM: 40.4
RHH5201_R3572
101.4
RHH5229_R3601
40.4
RHH5258_R3630
152.9
RHH5287_R3659
98.4
Non-Vd2 gdTCR nTPM: 84.2
Samples: 4
Max nTPM: 121.7
Min nTPM: 40.2
RHH5235_R3607
40.2
RHH5264_R3636
121.7
RHH5207_R3578
72.7
RHH5299_R3665
102.0
T-reg nTPM: 126.4
Samples: 4
Max nTPM: 157.8
Min nTPM: 88.8
RHH5301_R3667
146.8
RHH5237_R3609
157.8
RHH5266_R3638
88.8
RHH5209_R3580
112.1
Terminal effector memory CD4 T-cell nTPM: 70.9
Samples: 2
Max nTPM: 115.5
Min nTPM: 26.2
RHH5243_R3615
26.2
RHH5272_R3644
115.5
Terminal effector memory CD8 T-cell nTPM: 87.2
Samples: 4
Max nTPM: 118.6
Min nTPM: 62.3
RHH5232_R3604
62.3
RHH5204_R3575
103.9
RHH5261_R3633
63.8
RHH5296_R3662
118.6
Vd2 gdTCR nTPM: 93.0
Samples: 4
Max nTPM: 125.6
Min nTPM: 54.9
RHH5234_R3606
54.9
RHH5206_R3577
115.2
RHH5263_R3635
76.2
RHH5298_R3664
125.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
