HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:52.0 nTPM
HPA Brain:0.9 nTPM
GTEx:52.0 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:144.1 nTPM
Mouse:107.9 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043266
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 0.9
Sample id Sample description nTPM
Hippocampus
nTPM: 0.6
2529 Female, age 94, left hemisphere 0.7
1855 Male, age 76, left hemisphere 0.6
1898 Male, age 80, left hemisphere 0.6
1911 Female, age 85, right hemisphere 0.6
2148 Female, age 91, left hemisphere 0.6
2621 Female, age 67, right hemisphere 0.6
Dentate gyrus
nTPM: 0.6
2530 Female, age 94, left hemisphere 0.7
1927 Female, age 91, both hemispheres 0.6
2010 Male, age 76, both hemispheres 0.6
2246 Female, age 85, both hemispheres 0.6
2531 Female, age 67, both hemispheres 0.6
2528 Male, age 74, both hemispheres 0.5
Entorhinal gyrus
nTPM: 0.8
2117 Female, age 91, right hemisphere 1.7
2613 Female, age 94, left hemisphere 0.7
2686 Male, age 75, right hemisphere 0.7
1787 Male, age 76, left hemisphere 0.6
1938 Female, age 85, left hemisphere 0.6
2764 Male, age 80, right hemisphere 0.6
Hippocampus, CA1
nTPM: 0.6
1873 Female, age 85, both hemispheres 0.6
2045 Male, age 76, both hemispheres 0.6
2082 Female, age 91, right hemisphere 0.6
2527 Male, age 74, both hemispheres 0.6
2749 Male, age 80, left hemisphere 0.6
Hippocampus, CA2
nTPM: 0.6
2437 Female, age 94, left hemisphere 0.7
1892 Male, age 76, both hemispheres 0.6
1940 Female, age 85, left hemisphere 0.6
1963 Male, age 80, left hemisphere 0.6
2113 Female, age 91, right hemisphere 0.6
2249 Male, age 74, both hemispheres 0.6
Hippocampus, CA3
nTPM: 0.9
2861 Female, age 67, both hemispheres 2.0
2620 Female, age 94, left hemisphere 0.7
1867 Male, age 76, both hemispheres 0.6
1891 Female, age 85, both hemispheres 0.6
2137 Male, age 80, left hemisphere 0.6
2436 Male, age 74, both hemispheres 0.6
Parahippocampal cortex
nTPM: 0.7
1850 Male, age 80, both hemispheres 1.3
2532 Female, age 72, left hemisphere 0.7
2692 Male, age 74, both hemispheres 0.7
2693 Female, age 94, both hemispheres 0.7
1933 Female, age 85, both hemispheres 0.6
1990 Female, age 91, right hemisphere 0.6
2018 Male, age 76, both hemispheres 0.6
2245 Female, age 91, both hemispheres 0.6
2250 Female, age 67, right hemisphere 0.6
2622 Female, age 67, right hemisphere 0.6
Perirhinal gyrus
nTPM: 0.6
2521 Female, age 94, right hemisphere 0.7
1794 Male, age 80, right hemisphere 0.6
1841 Female, age 85, right hemisphere 0.6
1847 Female, age 91, left hemisphere 0.6
2848 Male, age 76, right hemisphere 0.6
Subiculum
nTPM: 0.7
2619 Male, age 74, both hemispheres 0.8
2438 Female, age 94, left hemisphere 0.7
1901 Male, age 80, both hemispheres 0.6
1977 Female, age 85, both hemispheres 0.6
2042 Male, age 76, both hemispheres 0.6
2729 Female, age 91, right hemisphere 0.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.0
Samples: 197

Max nTPM: 85.6
Min nTPM: 30.6
Std nTPM: 11.3
Median nTPM: 51.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 85.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 77.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 75.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 74.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 73.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 73.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 72.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 72.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10153-102I9 76 years, female 46.6
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.1
Pig sample Sample description nTPM
Subiculum
nTPM: 115.7
Samples: 4

Max nTPM: 158.5
Min nTPM: 97.7
Sample A Female 158.5
Sample B Female 101.9
Sample C Male 97.7
Sample D Male 104.5
Dorsal hippocampus
nTPM: 119.6
Samples: 4

Max nTPM: 150.4
Min nTPM: 92.5
Sample A Female 150.4
Sample B Female 114.1
Sample C Male 121.5
Sample D Male 92.5
Entorhinal cortex
nTPM: 144.1
Samples: 4

Max nTPM: 152.0
Min nTPM: 125.0
Sample A Female 150.3
Sample B Female 149.0
Sample C Male 152.0
Sample D Male 125.0
Ventral hippocampus
nTPM: 108.9
Samples: 4

Max nTPM: 121.0
Min nTPM: 83.2
Sample A Female 111.3
Sample B Female 83.2
Sample C Male 121.0
Sample D Male 120.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.9
Samples: 4

Max nTPM: 117.4
Min nTPM: 96.3
Sample A Male 96.3
Sample B Male 107.9
Sample C Female 117.4
Sample D Female 110.0
Hippocampal formation
nTPM: 107.9
Samples: 4

Max nTPM: 124.2
Min nTPM: 96.7
Sample A Male 124.2
Sample B Male 96.7
Sample C Female 108.7
Sample D Female 101.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
532738 Antisense, RP_040825_01_H12, Mouse strain C57BL/6J (56 days, male) 4.0

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