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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1602.5
nTPM
Monaco:
2491.9
nTPM
Schmiedel:
1129.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1602.5
HPA sample
nTPM
gdT-cell nTPM: 831.1
Samples: 6
Max nTPM: 1029.5
Min nTPM: 672.6
P10809_1007
892.6
P10809_1022
859.7
P10809_1041
1029.5
P10809_1060
672.6
P10809_1077
712.7
P10809_1098
819.5
MAIT T-cell nTPM: 1336.0
Samples: 6
Max nTPM: 1568.3
Min nTPM: 1123.2
P10809_1006
1298.6
P10809_1024
1384.9
P10809_1043
1370.3
P10809_1062
1270.7
P10809_1083
1123.2
P10809_1097
1568.3
Memory CD4 T-cell nTPM: 1395.2
Samples: 6
Max nTPM: 1659.6
Min nTPM: 948.9
P10809_1014
1608.2
P10809_1026
1654.8
P10809_1045
1659.6
P10809_1064
1138.3
P10809_1086
948.9
P10809_1113
1361.4
Memory CD8 T-cell nTPM: 1062.0
Samples: 5
Max nTPM: 1284.0
Min nTPM: 868.2
P10809_1012
1284.0
P10809_1027
1000.4
P10809_1046
1170.6
P10809_1065
868.2
P10809_1111
986.8
Naive CD4 T-cell nTPM: 1602.5
Samples: 6
Max nTPM: 1953.1
Min nTPM: 1241.1
P10809_1015
1735.7
P10809_1030
1648.3
P10809_1049
1953.1
P10809_1068
1558.3
P10809_1085
1241.1
P10809_1112
1478.7
Naive CD8 T-cell nTPM: 1352.7
Samples: 6
Max nTPM: 2006.7
Min nTPM: 699.7
P10809_1016
2006.7
P10809_1031
1538.0
P10809_1050
1264.4
P10809_1069
1202.5
P10809_1087
699.7
P10809_1110
1405.1
T-reg nTPM: 1469.1
Samples: 6
Max nTPM: 1595.3
Min nTPM: 1371.9
P10809_1018
1465.0
P10809_1037
1371.9
P10809_1056
1595.3
P10809_1075
1372.3
P10809_1094
1540.0
P10809_1106
1470.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2491.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1814.7
Samples: 4
Max nTPM: 2778.2
Min nTPM: 1047.9
RHH5202_R3573
1987.4
RHH5230_R3602
1445.2
RHH5259_R3631
1047.9
RHH5288_R3660
2778.2
Effector memory CD8 T-cell nTPM: 1153.5
Samples: 4
Max nTPM: 1490.2
Min nTPM: 813.5
RHH5203_R3574
1477.2
RHH5231_R3603
1490.2
RHH5260_R3632
813.5
RHH5289_R3661
833.1
MAIT T-cell nTPM: 1944.8
Samples: 4
Max nTPM: 2880.9
Min nTPM: 1093.5
RHH5233_R3605
2075.2
RHH5205_R3576
1093.5
RHH5262_R3634
1729.4
RHH5297_R3663
2880.9
Memory CD4 T-cell TFH nTPM: 2330.5
Samples: 4
Max nTPM: 2878.6
Min nTPM: 2039.1
RHH5300_R3666
2878.6
RHH5236_R3608
2101.4
RHH5265_R3637
2039.1
RHH5208_R3579
2302.9
Memory CD4 T-cell Th1 nTPM: 2126.5
Samples: 4
Max nTPM: 3605.7
Min nTPM: 1306.1
RHH5210_R3581
2243.0
RHH5302_R3668
3605.7
RHH5238_R3610
1351.3
RHH5267_R3639
1306.1
Memory CD4 T-cell Th1/Th17 nTPM: 1968.3
Samples: 4
Max nTPM: 2961.7
Min nTPM: 1046.4
RHH5303_R3669
2961.7
RHH5211_R3582
2494.4
RHH5239_R3611
1046.4
RHH5268_R3640
1370.8
Memory CD4 T-cell Th17 nTPM: 1588.8
Samples: 4
Max nTPM: 2202.4
Min nTPM: 1066.7
RHH5304_R3670
1851.8
RHH5212_R3583
2202.4
RHH5240_R3612
1066.7
RHH5269_R3641
1234.2
Memory CD4 T-cell Th2 nTPM: 2359.6
Samples: 4
Max nTPM: 3136.9
Min nTPM: 1680.8
RHH5305_R3671
2699.4
RHH5213_R3584
1921.1
RHH5241_R3613
3136.9
RHH5270_R3642
1680.8
Naive CD4 T-cell nTPM: 2491.9
Samples: 4
Max nTPM: 3254.3
Min nTPM: 1654.9
RHH5306_R3672
3254.3
RHH5214_R3585
2537.3
RHH5242_R3614
2521.0
RHH5271_R3643
1654.9
Naive CD8 T-cell nTPM: 2157.4
Samples: 4
Max nTPM: 2882.3
Min nTPM: 1196.0
RHH5201_R3572
2488.5
RHH5229_R3601
1196.0
RHH5258_R3630
2882.3
RHH5287_R3659
2062.7
Non-Vd2 gdTCR nTPM: 1251.4
Samples: 4
Max nTPM: 1895.2
Min nTPM: 702.6
RHH5235_R3607
702.6
RHH5264_R3636
1369.6
RHH5207_R3578
1038.2
RHH5299_R3665
1895.2
T-reg nTPM: 2053.4
Samples: 4
Max nTPM: 3397.5
Min nTPM: 1352.4
RHH5301_R3667
3397.5
RHH5237_R3609
2065.1
RHH5266_R3638
1352.4
RHH5209_R3580
1398.6
Terminal effector memory CD4 T-cell nTPM: 1309.1
Samples: 2
Max nTPM: 1867.2
Min nTPM: 751.0
RHH5243_R3615
751.0
RHH5272_R3644
1867.2
Terminal effector memory CD8 T-cell nTPM: 1443.2
Samples: 4
Max nTPM: 1830.0
Min nTPM: 780.0
RHH5232_R3604
1397.4
RHH5204_R3575
1765.3
RHH5261_R3633
780.0
RHH5296_R3662
1830.0
Vd2 gdTCR nTPM: 1810.8
Samples: 4
Max nTPM: 2643.2
Min nTPM: 1077.1
RHH5234_R3606
1659.0
RHH5206_R3577
1863.9
RHH5263_R3635
1077.1
RHH5298_R3664
2643.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.