HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:121.5 nTPM
HPA Brain:76.4 nTPM
GTEx:121.5 nTPM
FANTOM5:220.2 Scaled Tags Per Million
Pig:344.5 nTPM
Mouse:355.2 nTPM
Allen mouse:18.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050483
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.4
Sample id Sample description nTPM
Hippocampus
nTPM: 65.1
2621 Female, age 67, right hemisphere 81.9
1898 Male, age 80, left hemisphere 73.6
2529 Female, age 94, left hemisphere 61.5
2148 Female, age 91, left hemisphere 60.3
1855 Male, age 76, left hemisphere 57.5
1911 Female, age 85, right hemisphere 55.7
Dentate gyrus
nTPM: 67.0
2246 Female, age 85, both hemispheres 86.7
2530 Female, age 94, left hemisphere 74.9
2531 Female, age 67, both hemispheres 72.6
2528 Male, age 74, both hemispheres 68.0
1927 Female, age 91, both hemispheres 50.6
2010 Male, age 76, both hemispheres 49.4
Entorhinal gyrus
nTPM: 76.4
1938 Female, age 85, left hemisphere 117.4
2764 Male, age 80, right hemisphere 93.2
2613 Female, age 94, left hemisphere 90.1
2686 Male, age 75, right hemisphere 60.7
1787 Male, age 76, left hemisphere 51.5
2117 Female, age 91, right hemisphere 45.6
Hippocampus, CA1
nTPM: 66.5
2527 Male, age 74, both hemispheres 88.5
2749 Male, age 80, left hemisphere 74.5
2045 Male, age 76, both hemispheres 59.6
2082 Female, age 91, right hemisphere 57.7
1873 Female, age 85, both hemispheres 52.2
Hippocampus, CA2
nTPM: 60.7
2249 Male, age 74, both hemispheres 74.3
1963 Male, age 80, left hemisphere 64.2
2113 Female, age 91, right hemisphere 63.3
1940 Female, age 85, left hemisphere 59.8
1892 Male, age 76, both hemispheres 56.3
2437 Female, age 94, left hemisphere 46.1
Hippocampus, CA3
nTPM: 68.3
2620 Female, age 94, left hemisphere 87.2
2861 Female, age 67, both hemispheres 86.1
2436 Male, age 74, both hemispheres 83.8
2137 Male, age 80, left hemisphere 68.1
1891 Female, age 85, both hemispheres 42.7
1867 Male, age 76, both hemispheres 41.7
Parahippocampal cortex
nTPM: 74.2
2692 Male, age 74, both hemispheres 89.9
2622 Female, age 67, right hemisphere 89.1
2532 Female, age 72, left hemisphere 87.5
2250 Female, age 67, right hemisphere 80.5
1990 Female, age 91, right hemisphere 75.5
2693 Female, age 94, both hemispheres 72.1
2245 Female, age 91, both hemispheres 70.6
1933 Female, age 85, both hemispheres 65.8
1850 Male, age 80, both hemispheres 57.2
2018 Male, age 76, both hemispheres 54.2
Perirhinal gyrus
nTPM: 72.4
1847 Female, age 91, left hemisphere 95.2
2848 Male, age 76, right hemisphere 77.2
1841 Female, age 85, right hemisphere 76.7
1794 Male, age 80, right hemisphere 63.5
2521 Female, age 94, right hemisphere 49.5
Subiculum
nTPM: 58.8
1977 Female, age 85, both hemispheres 84.2
2619 Male, age 74, both hemispheres 76.8
1901 Male, age 80, both hemispheres 59.3
2729 Female, age 91, right hemisphere 54.5
2438 Female, age 94, left hemisphere 45.7
2042 Male, age 76, both hemispheres 32.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 121.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 121.5
Samples: 197

Max nTPM: 325.2
Min nTPM: 28.0
Std nTPM: 50.5
Median nTPM: 116.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 325.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 273.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 262.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 247.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 228.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 217.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 212.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 212.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 211.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 205.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 205.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 220.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 220.2
FF:10169-103B7 60 years, female 238.8
FF:10153-102I9 76 years, female 201.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 344.5
Pig sample Sample description nTPM
Subiculum
nTPM: 317.1
Samples: 4

Max nTPM: 403.0
Min nTPM: 260.6
Sample A Female 403.0
Sample B Female 293.0
Sample C Male 311.6
Sample D Male 260.6
Dorsal hippocampus
nTPM: 343.2
Samples: 4

Max nTPM: 409.0
Min nTPM: 276.2
Sample A Female 409.0
Sample B Female 399.2
Sample C Male 288.4
Sample D Male 276.2
Entorhinal cortex
nTPM: 329.0
Samples: 4

Max nTPM: 369.1
Min nTPM: 289.1
Sample A Female 369.1
Sample B Female 289.1
Sample C Male 344.6
Sample D Male 313.0
Ventral hippocampus
nTPM: 344.5
Samples: 4

Max nTPM: 415.2
Min nTPM: 256.8
Sample A Female 291.5
Sample B Female 256.8
Sample C Male 415.2
Sample D Male 414.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 355.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 344.3
Samples: 4

Max nTPM: 364.1
Min nTPM: 325.1
Sample A Male 346.0
Sample B Male 342.0
Sample C Female 325.1
Sample D Female 364.1
Hippocampal formation
nTPM: 355.2
Samples: 4

Max nTPM: 390.6
Min nTPM: 320.9
Sample A Male 345.4
Sample B Male 364.0
Sample C Female 390.6
Sample D Female 320.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.7
68862120 Antisense, RP_050301_01_E12, Mouse strain C57BL/6J (56 days, male) 18.7

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