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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.7
nTPM
Monaco:
39.3
nTPM
Schmiedel:
29.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.7
HPA sample
nTPM
gdT-cell nTPM: 40.4
Samples: 6
Max nTPM: 47.6
Min nTPM: 31.7
P10809_1007
32.5
P10809_1022
47.1
P10809_1041
41.1
P10809_1060
42.5
P10809_1077
31.7
P10809_1098
47.6
MAIT T-cell nTPM: 43.9
Samples: 6
Max nTPM: 68.5
Min nTPM: 34.6
P10809_1006
40.4
P10809_1024
37.7
P10809_1043
43.8
P10809_1062
38.1
P10809_1083
34.6
P10809_1097
68.5
Memory CD4 T-cell nTPM: 43.5
Samples: 6
Max nTPM: 65.4
Min nTPM: 31.3
P10809_1014
34.9
P10809_1026
65.4
P10809_1045
40.2
P10809_1064
40.4
P10809_1086
31.3
P10809_1113
49.0
Memory CD8 T-cell nTPM: 39.5
Samples: 5
Max nTPM: 50.5
Min nTPM: 34.3
P10809_1012
34.3
P10809_1027
34.6
P10809_1046
50.5
P10809_1065
38.4
P10809_1111
39.9
Naive CD4 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 63.6
Min nTPM: 30.7
P10809_1015
30.7
P10809_1030
43.8
P10809_1049
63.6
P10809_1068
48.7
P10809_1085
43.5
P10809_1112
57.1
Naive CD8 T-cell nTPM: 40.6
Samples: 6
Max nTPM: 48.7
Min nTPM: 31.0
P10809_1016
37.9
P10809_1031
41.9
P10809_1050
38.4
P10809_1069
45.8
P10809_1087
31.0
P10809_1110
48.7
T-reg nTPM: 49.7
Samples: 6
Max nTPM: 65.1
Min nTPM: 34.9
P10809_1018
34.9
P10809_1037
37.1
P10809_1056
57.2
P10809_1075
49.6
P10809_1094
54.3
P10809_1106
65.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 38.2
Min nTPM: 10.8
RHH5202_R3573
10.8
RHH5230_R3602
17.3
RHH5259_R3631
28.8
RHH5288_R3660
38.2
Effector memory CD8 T-cell nTPM: 25.8
Samples: 4
Max nTPM: 31.1
Min nTPM: 17.7
RHH5203_R3574
29.0
RHH5231_R3603
31.1
RHH5260_R3632
25.2
RHH5289_R3661
17.7
MAIT T-cell nTPM: 38.8
Samples: 4
Max nTPM: 72.8
Min nTPM: 17.9
RHH5233_R3605
35.2
RHH5205_R3576
17.9
RHH5262_R3634
29.2
RHH5297_R3663
72.8
Memory CD4 T-cell TFH nTPM: 28.9
Samples: 4
Max nTPM: 38.9
Min nTPM: 10.6
RHH5300_R3666
32.7
RHH5236_R3608
38.9
RHH5265_R3637
33.3
RHH5208_R3579
10.6
Memory CD4 T-cell Th1 nTPM: 26.5
Samples: 4
Max nTPM: 39.4
Min nTPM: 14.4
RHH5210_R3581
30.9
RHH5302_R3668
39.4
RHH5238_R3610
14.4
RHH5267_R3639
21.2
Memory CD4 T-cell Th1/Th17 nTPM: 21.8
Samples: 4
Max nTPM: 29.7
Min nTPM: 9.3
RHH5303_R3669
20.5
RHH5211_R3582
29.7
RHH5239_R3611
9.3
RHH5268_R3640
27.6
Memory CD4 T-cell Th17 nTPM: 20.4
Samples: 4
Max nTPM: 24.3
Min nTPM: 14.3
RHH5304_R3670
24.3
RHH5212_R3583
21.7
RHH5240_R3612
14.3
RHH5269_R3641
21.3
Memory CD4 T-cell Th2 nTPM: 35.5
Samples: 4
Max nTPM: 46.7
Min nTPM: 20.6
RHH5305_R3671
36.3
RHH5213_R3584
20.6
RHH5241_R3613
46.7
RHH5270_R3642
38.3
Naive CD4 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 46.1
Min nTPM: 21.5
RHH5306_R3672
46.1
RHH5214_R3585
39.1
RHH5242_R3614
33.2
RHH5271_R3643
21.5
Naive CD8 T-cell nTPM: 18.2
Samples: 4
Max nTPM: 42.2
Min nTPM: 1.8
RHH5201_R3572
1.8
RHH5229_R3601
6.8
RHH5258_R3630
42.2
RHH5287_R3659
21.8
Non-Vd2 gdTCR nTPM: 36.8
Samples: 4
Max nTPM: 50.4
Min nTPM: 21.5
RHH5235_R3607
26.0
RHH5264_R3636
49.1
RHH5207_R3578
21.5
RHH5299_R3665
50.4
T-reg nTPM: 39.3
Samples: 4
Max nTPM: 51.5
Min nTPM: 23.2
RHH5301_R3667
48.1
RHH5237_R3609
51.5
RHH5266_R3638
34.2
RHH5209_R3580
23.2
Terminal effector memory CD4 T-cell nTPM: 26.5
Samples: 2
Max nTPM: 36.8
Min nTPM: 16.1
RHH5243_R3615
16.1
RHH5272_R3644
36.8
Terminal effector memory CD8 T-cell nTPM: 31.2
Samples: 4
Max nTPM: 48.0
Min nTPM: 22.0
RHH5232_R3604
32.2
RHH5204_R3575
48.0
RHH5261_R3633
22.0
RHH5296_R3662
22.6
Vd2 gdTCR nTPM: 36.6
Samples: 4
Max nTPM: 55.6
Min nTPM: 21.9
RHH5234_R3606
24.7
RHH5206_R3577
44.2
RHH5263_R3635
21.9
RHH5298_R3664
55.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
