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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
171.0
nTPM
Monaco:
47.8
nTPM
Schmiedel:
1.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.0
HPA sample
nTPM
gdT-cell nTPM: 110.7
Samples: 6
Max nTPM: 156.1
Min nTPM: 79.2
P10809_1007
79.2
P10809_1022
93.4
P10809_1041
156.1
P10809_1060
118.9
P10809_1077
120.0
P10809_1098
96.7
MAIT T-cell nTPM: 101.3
Samples: 6
Max nTPM: 152.6
Min nTPM: 60.0
P10809_1006
60.0
P10809_1024
152.6
P10809_1043
89.7
P10809_1062
96.5
P10809_1083
115.7
P10809_1097
93.2
Memory CD4 T-cell nTPM: 116.2
Samples: 6
Max nTPM: 144.8
Min nTPM: 77.1
P10809_1014
77.1
P10809_1026
144.8
P10809_1045
112.8
P10809_1064
122.5
P10809_1086
134.1
P10809_1113
105.7
Memory CD8 T-cell nTPM: 119.0
Samples: 5
Max nTPM: 141.5
Min nTPM: 82.0
P10809_1012
82.0
P10809_1027
141.5
P10809_1046
123.0
P10809_1065
134.9
P10809_1111
113.8
Naive CD4 T-cell nTPM: 92.0
Samples: 6
Max nTPM: 123.9
Min nTPM: 54.1
P10809_1015
54.1
P10809_1030
99.3
P10809_1049
122.4
P10809_1068
81.3
P10809_1085
123.9
P10809_1112
71.1
Naive CD8 T-cell nTPM: 103.3
Samples: 6
Max nTPM: 128.0
Min nTPM: 56.0
P10809_1016
56.0
P10809_1031
125.4
P10809_1050
105.8
P10809_1069
122.3
P10809_1087
128.0
P10809_1110
82.4
T-reg nTPM: 171.1
Samples: 6
Max nTPM: 227.9
Min nTPM: 101.3
P10809_1018
101.3
P10809_1037
224.4
P10809_1056
227.9
P10809_1075
150.4
P10809_1094
154.9
P10809_1106
167.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 32.8
Samples: 4
Max nTPM: 43.1
Min nTPM: 19.2
RHH5202_R3573
42.7
RHH5230_R3602
19.2
RHH5259_R3631
43.1
RHH5288_R3660
26.1
Effector memory CD8 T-cell nTPM: 35.1
Samples: 4
Max nTPM: 55.7
Min nTPM: 17.5
RHH5203_R3574
55.7
RHH5231_R3603
42.1
RHH5260_R3632
25.2
RHH5289_R3661
17.5
MAIT T-cell nTPM: 26.6
Samples: 4
Max nTPM: 36.1
Min nTPM: 16.4
RHH5233_R3605
36.1
RHH5205_R3576
21.2
RHH5262_R3634
16.4
RHH5297_R3663
32.8
Memory CD4 T-cell TFH nTPM: 35.4
Samples: 4
Max nTPM: 44.9
Min nTPM: 22.0
RHH5300_R3666
22.0
RHH5236_R3608
37.6
RHH5265_R3637
37.1
RHH5208_R3579
44.9
Memory CD4 T-cell Th1 nTPM: 33.0
Samples: 4
Max nTPM: 45.5
Min nTPM: 22.1
RHH5210_R3581
38.3
RHH5302_R3668
45.5
RHH5238_R3610
22.1
RHH5267_R3639
25.9
Memory CD4 T-cell Th1/Th17 nTPM: 37.1
Samples: 4
Max nTPM: 55.2
Min nTPM: 23.3
RHH5303_R3669
41.2
RHH5211_R3582
55.2
RHH5239_R3611
23.3
RHH5268_R3640
28.6
Memory CD4 T-cell Th17 nTPM: 23.9
Samples: 4
Max nTPM: 40.4
Min nTPM: 13.3
RHH5304_R3670
13.3
RHH5212_R3583
40.4
RHH5240_R3612
17.0
RHH5269_R3641
24.9
Memory CD4 T-cell Th2 nTPM: 28.5
Samples: 4
Max nTPM: 39.4
Min nTPM: 17.7
RHH5305_R3671
17.7
RHH5213_R3584
39.4
RHH5241_R3613
37.2
RHH5270_R3642
19.6
Naive CD4 T-cell nTPM: 21.2
Samples: 4
Max nTPM: 38.0
Min nTPM: 10.3
RHH5306_R3672
17.2
RHH5214_R3585
38.0
RHH5242_R3614
19.2
RHH5271_R3643
10.3
Naive CD8 T-cell nTPM: 15.7
Samples: 4
Max nTPM: 25.9
Min nTPM: 8.2
RHH5201_R3572
25.9
RHH5229_R3601
8.2
RHH5258_R3630
18.6
RHH5287_R3659
10.0
Non-Vd2 gdTCR nTPM: 35.4
Samples: 4
Max nTPM: 48.3
Min nTPM: 22.7
RHH5235_R3607
29.6
RHH5264_R3636
48.3
RHH5207_R3578
22.7
RHH5299_R3665
40.9
T-reg nTPM: 40.9
Samples: 4
Max nTPM: 60.9
Min nTPM: 21.3
RHH5301_R3667
60.9
RHH5237_R3609
42.1
RHH5266_R3638
21.3
RHH5209_R3580
39.2
Terminal effector memory CD4 T-cell nTPM: 24.1
Samples: 2
Max nTPM: 26.0
Min nTPM: 22.1
RHH5243_R3615
26.0
RHH5272_R3644
22.1
Terminal effector memory CD8 T-cell nTPM: 47.8
Samples: 4
Max nTPM: 78.1
Min nTPM: 36.5
RHH5232_R3604
36.5
RHH5204_R3575
78.1
RHH5261_R3633
37.4
RHH5296_R3662
39.1
Vd2 gdTCR nTPM: 32.3
Samples: 4
Max nTPM: 57.4
Min nTPM: 18.7
RHH5234_R3606
24.9
RHH5206_R3577
57.4
RHH5263_R3635
18.7
RHH5298_R3664
28.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
