HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		83.733
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:54.7 nTPM
GTEx:21.8 nTPM
FANTOM5:182.5 Scaled Tags Per Million
Pig:73.0 nTPM
Mouse:65.0 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019002
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA019002
Hippocampal formation mean intensity 83.733
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 43.339
Molecular layer of the dentate gyrus 38.980
Granular dentate gyrus 52.669
CA1 - oriens layer 50.848
CA1 - pyramidal layer 59.390
CA1 - radiatum layer 42.307
CA2 - oriens layer 52.033
CA2 - pyramidal layer 61.108
CA2 - radiatum layer 42.770
CA3 - oriens layer 52.091
CA3 - pyramidal layer 76.467
CA3 - radiatum layer 49.834
Stratum lucidum 44.770
Lacunosum moleculare 64.185
Subiculum 83.733

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.7
Sample id Sample description nTPM
Hippocampus
nTPM: 47.4
1898 Male, age 80, left hemisphere 56.5
1911 Female, age 85, right hemisphere 50.2
2621 Female, age 67, right hemisphere 50.2
1855 Male, age 76, left hemisphere 45.7
2529 Female, age 94, left hemisphere 41.1
2148 Female, age 91, left hemisphere 40.8
Dentate gyrus
nTPM: 51.6
2010 Male, age 76, both hemispheres 60.8
2246 Female, age 85, both hemispheres 53.0
1927 Female, age 91, both hemispheres 52.6
2530 Female, age 94, left hemisphere 50.6
2528 Male, age 74, both hemispheres 48.5
2531 Female, age 67, both hemispheres 44.4
Entorhinal gyrus
nTPM: 46.2
1787 Male, age 76, left hemisphere 53.3
1938 Female, age 85, left hemisphere 52.7
2764 Male, age 80, right hemisphere 45.6
2117 Female, age 91, right hemisphere 43.2
2686 Male, age 75, right hemisphere 42.8
2613 Female, age 94, left hemisphere 39.7
Hippocampus, CA1
nTPM: 52.5
2749 Male, age 80, left hemisphere 61.7
1873 Female, age 85, both hemispheres 54.5
2045 Male, age 76, both hemispheres 49.7
2527 Male, age 74, both hemispheres 48.4
2082 Female, age 91, right hemisphere 47.9
Hippocampus, CA2
nTPM: 48.4
1892 Male, age 76, both hemispheres 59.8
1940 Female, age 85, left hemisphere 50.7
2113 Female, age 91, right hemisphere 48.4
2437 Female, age 94, left hemisphere 46.5
1963 Male, age 80, left hemisphere 42.6
2249 Male, age 74, both hemispheres 42.3
Hippocampus, CA3
nTPM: 49.1
2137 Male, age 80, left hemisphere 55.9
1867 Male, age 76, both hemispheres 55.1
1891 Female, age 85, both hemispheres 54.0
2436 Male, age 74, both hemispheres 51.9
2620 Female, age 94, left hemisphere 42.9
2861 Female, age 67, both hemispheres 34.5
Parahippocampal cortex
nTPM: 48.7
1850 Male, age 80, both hemispheres 63.1
1990 Female, age 91, right hemisphere 53.4
2018 Male, age 76, both hemispheres 50.0
2693 Female, age 94, both hemispheres 49.3
1933 Female, age 85, both hemispheres 48.3
2692 Male, age 74, both hemispheres 46.6
2245 Female, age 91, both hemispheres 45.8
2532 Female, age 72, left hemisphere 44.1
2622 Female, age 67, right hemisphere 43.5
2250 Female, age 67, right hemisphere 43.1
Perirhinal gyrus
nTPM: 54.7
1794 Male, age 80, right hemisphere 61.2
1841 Female, age 85, right hemisphere 55.3
1847 Female, age 91, left hemisphere 54.7
2848 Male, age 76, right hemisphere 53.5
2521 Female, age 94, right hemisphere 48.9
Subiculum
nTPM: 49.4
1977 Female, age 85, both hemispheres 55.2
2438 Female, age 94, left hemisphere 52.1
1901 Male, age 80, both hemispheres 49.1
2729 Female, age 91, right hemisphere 48.4
2619 Male, age 74, both hemispheres 46.6
2042 Male, age 76, both hemispheres 44.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 38.8
Min nTPM: 14.3
Std nTPM: 4.5
Median nTPM: 20.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 38.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 35.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 35.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 33.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 33.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 33.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 31.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 30.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 30.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 30.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.5
FF:10169-103B7 60 years, female 240.9
FF:10153-102I9 76 years, female 124.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.0
Pig sample Sample description nTPM
Subiculum
nTPM: 65.0
Samples: 4

Max nTPM: 80.7
Min nTPM: 59.4
Sample A Female 80.7
Sample B Female 59.8
Sample C Male 60.1
Sample D Male 59.4
Dorsal hippocampus
nTPM: 73.0
Samples: 4

Max nTPM: 84.9
Min nTPM: 60.2
Sample A Female 84.9
Sample B Female 70.7
Sample C Male 76.1
Sample D Male 60.2
Entorhinal cortex
nTPM: 65.3
Samples: 4

Max nTPM: 71.6
Min nTPM: 57.0
Sample A Female 69.2
Sample B Female 71.6
Sample C Male 63.5
Sample D Male 57.0
Ventral hippocampus
nTPM: 64.7
Samples: 4

Max nTPM: 75.0
Min nTPM: 54.5
Sample A Female 75.0
Sample B Female 54.5
Sample C Male 61.4
Sample D Male 67.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.0
Samples: 4

Max nTPM: 69.8
Min nTPM: 60.9
Sample A Male 60.9
Sample B Male 64.0
Sample C Female 65.1
Sample D Female 69.8
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 68.8
Min nTPM: 58.1
Sample A Male 62.4
Sample B Male 66.0
Sample C Female 68.8
Sample D Female 58.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69735502 Antisense, RP_050503_02_H11, Mouse strain C57BL/6J (56 days, male) 5.1

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