HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.9 nTPM
HPA Brain:45.7 nTPM
GTEx:20.9 nTPM
FANTOM5:12.0 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:22.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058346
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 45.7
2529 Female, age 94, left hemisphere 59.0
2621 Female, age 67, right hemisphere 53.7
1911 Female, age 85, right hemisphere 48.0
2148 Female, age 91, left hemisphere 40.8
1898 Male, age 80, left hemisphere 38.1
1855 Male, age 76, left hemisphere 34.4
Dentate gyrus
nTPM: 39.2
2531 Female, age 67, both hemispheres 61.2
2528 Male, age 74, both hemispheres 40.8
2246 Female, age 85, both hemispheres 38.9
2530 Female, age 94, left hemisphere 33.6
1927 Female, age 91, both hemispheres 31.3
2010 Male, age 76, both hemispheres 29.4
Entorhinal gyrus
nTPM: 42.2
1787 Male, age 76, left hemisphere 51.6
2117 Female, age 91, right hemisphere 46.9
2764 Male, age 80, right hemisphere 41.7
2686 Male, age 75, right hemisphere 41.3
1938 Female, age 85, left hemisphere 36.8
2613 Female, age 94, left hemisphere 34.8
Hippocampus, CA1
nTPM: 45.5
2527 Male, age 74, both hemispheres 65.1
2082 Female, age 91, right hemisphere 56.9
2749 Male, age 80, left hemisphere 39.6
1873 Female, age 85, both hemispheres 37.2
2045 Male, age 76, both hemispheres 28.7
Hippocampus, CA2
nTPM: 41.1
2113 Female, age 91, right hemisphere 63.3
2249 Male, age 74, both hemispheres 43.5
1963 Male, age 80, left hemisphere 42.9
2437 Female, age 94, left hemisphere 38.3
1940 Female, age 85, left hemisphere 36.1
1892 Male, age 76, both hemispheres 22.6
Hippocampus, CA3
nTPM: 44.0
2861 Female, age 67, both hemispheres 60.6
2436 Male, age 74, both hemispheres 59.2
2137 Male, age 80, left hemisphere 49.5
2620 Female, age 94, left hemisphere 33.2
1891 Female, age 85, both hemispheres 32.9
1867 Male, age 76, both hemispheres 28.6
Parahippocampal cortex
nTPM: 44.4
2245 Female, age 91, both hemispheres 58.7
2250 Female, age 67, right hemisphere 57.9
1933 Female, age 85, both hemispheres 48.8
2622 Female, age 67, right hemisphere 47.7
2018 Male, age 76, both hemispheres 45.5
2693 Female, age 94, both hemispheres 44.5
2692 Male, age 74, both hemispheres 40.6
1990 Female, age 91, right hemisphere 37.5
2532 Female, age 72, left hemisphere 33.5
1850 Male, age 80, both hemispheres 29.6
Perirhinal gyrus
nTPM: 43.6
1794 Male, age 80, right hemisphere 48.0
1847 Female, age 91, left hemisphere 48.0
2521 Female, age 94, right hemisphere 47.7
1841 Female, age 85, right hemisphere 40.1
2848 Male, age 76, right hemisphere 33.9
Subiculum
nTPM: 40.5
2619 Male, age 74, both hemispheres 50.1
2729 Female, age 91, right hemisphere 45.6
1977 Female, age 85, both hemispheres 43.3
2042 Male, age 76, both hemispheres 37.7
1901 Male, age 80, both hemispheres 34.3
2438 Female, age 94, left hemisphere 32.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 74.3
Min nTPM: 5.2
Std nTPM: 11.4
Median nTPM: 17.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 74.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 60.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 60.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 59.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 54.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 53.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 50.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 50.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 49.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 47.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 43.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.0
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.7
Sample A Female 9.6
Sample B Female 8.4
Sample C Male 7.7
Sample D Male 5.7
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.3
Sample A Female 4.5
Sample B Female 4.9
Sample C Male 4.3
Sample D Male 4.3
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 7.9
Min nTPM: 4.8
Sample A Female 5.7
Sample B Female 5.1
Sample C Male 7.9
Sample D Male 4.8
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 8.9
Min nTPM: 4.1
Sample A Female 4.5
Sample B Female 6.8
Sample C Male 8.9
Sample D Male 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 23.2
Min nTPM: 22.2
Sample A Male 23.2
Sample B Male 23.0
Sample C Female 22.2
Sample D Female 23.0
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 12.2
Sample A Male 18.2
Sample B Male 15.2
Sample C Female 12.2
Sample D Female 16.8

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