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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.7
nTPM
Monaco:
80.2
nTPM
Schmiedel:
236.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.7
HPA sample
nTPM
gdT-cell nTPM: 42.3
Samples: 6
Max nTPM: 97.4
Min nTPM: 0.6
P10809_1007
37.3
P10809_1022
0.6
P10809_1041
97.4
P10809_1060
36.8
P10809_1077
40.3
P10809_1098
41.3
MAIT T-cell nTPM: 39.6
Samples: 6
Max nTPM: 75.0
Min nTPM: 1.4
P10809_1006
45.6
P10809_1024
1.4
P10809_1043
75.0
P10809_1062
34.1
P10809_1083
37.0
P10809_1097
44.6
Memory CD4 T-cell nTPM: 51.9
Samples: 6
Max nTPM: 105.4
Min nTPM: 5.2
P10809_1014
46.1
P10809_1026
5.2
P10809_1045
105.4
P10809_1064
48.4
P10809_1086
45.4
P10809_1113
61.0
Memory CD8 T-cell nTPM: 53.3
Samples: 5
Max nTPM: 101.5
Min nTPM: 5.8
P10809_1012
61.0
P10809_1027
5.8
P10809_1046
101.5
P10809_1065
46.1
P10809_1111
52.1
Naive CD4 T-cell nTPM: 45.3
Samples: 6
Max nTPM: 84.3
Min nTPM: 2.3
P10809_1015
44.6
P10809_1030
2.3
P10809_1049
84.3
P10809_1068
41.7
P10809_1085
43.9
P10809_1112
55.0
Naive CD8 T-cell nTPM: 52.4
Samples: 6
Max nTPM: 95.1
Min nTPM: 3.0
P10809_1016
65.0
P10809_1031
3.0
P10809_1050
95.1
P10809_1069
47.8
P10809_1087
40.9
P10809_1110
62.8
T-reg nTPM: 69.7
Samples: 6
Max nTPM: 105.9
Min nTPM: 4.0
P10809_1018
65.7
P10809_1037
4.0
P10809_1056
105.9
P10809_1075
71.1
P10809_1094
81.4
P10809_1106
90.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 124.7
Min nTPM: 0.1
RHH5202_R3573
124.7
RHH5230_R3602
0.1
RHH5259_R3631
9.8
RHH5288_R3660
117.6
Effector memory CD8 T-cell nTPM: 60.4
Samples: 4
Max nTPM: 119.3
Min nTPM: 1.6
RHH5203_R3574
116.2
RHH5231_R3603
4.6
RHH5260_R3632
1.6
RHH5289_R3661
119.3
MAIT T-cell nTPM: 47.3
Samples: 4
Max nTPM: 105.3
Min nTPM: 4.0
RHH5233_R3605
13.4
RHH5205_R3576
105.3
RHH5262_R3634
4.0
RHH5297_R3663
66.6
Memory CD4 T-cell TFH nTPM: 69.7
Samples: 4
Max nTPM: 140.5
Min nTPM: 4.2
RHH5300_R3666
124.0
RHH5236_R3608
4.2
RHH5265_R3637
9.9
RHH5208_R3579
140.5
Memory CD4 T-cell Th1 nTPM: 41.5
Samples: 4
Max nTPM: 87.9
Min nTPM: 4.7
RHH5210_R3581
87.9
RHH5302_R3668
67.9
RHH5238_R3610
5.5
RHH5267_R3639
4.7
Memory CD4 T-cell Th1/Th17 nTPM: 58.5
Samples: 4
Max nTPM: 107.6
Min nTPM: 6.7
RHH5303_R3669
107.6
RHH5211_R3582
106.2
RHH5239_R3611
13.4
RHH5268_R3640
6.7
Memory CD4 T-cell Th17 nTPM: 50.4
Samples: 4
Max nTPM: 108.7
Min nTPM: 1.8
RHH5304_R3670
108.7
RHH5212_R3583
87.3
RHH5240_R3612
1.8
RHH5269_R3641
3.9
Memory CD4 T-cell Th2 nTPM: 65.4
Samples: 4
Max nTPM: 131.7
Min nTPM: 3.5
RHH5305_R3671
117.1
RHH5213_R3584
131.7
RHH5241_R3613
3.5
RHH5270_R3642
9.2
Naive CD4 T-cell nTPM: 51.1
Samples: 4
Max nTPM: 96.0
Min nTPM: 1.0
RHH5306_R3672
96.0
RHH5214_R3585
82.5
RHH5242_R3614
25.0
RHH5271_R3643
1.0
Naive CD8 T-cell nTPM: 80.2
Samples: 4
Max nTPM: 159.0
Min nTPM: 5.5
RHH5201_R3572
147.3
RHH5229_R3601
5.5
RHH5258_R3630
9.1
RHH5287_R3659
159.0
Non-Vd2 gdTCR nTPM: 53.5
Samples: 4
Max nTPM: 115.3
Min nTPM: 1.8
RHH5235_R3607
10.9
RHH5264_R3636
1.8
RHH5207_R3578
115.3
RHH5299_R3665
86.1
T-reg nTPM: 61.8
Samples: 4
Max nTPM: 125.1
Min nTPM: 7.3
RHH5301_R3667
106.7
RHH5237_R3609
7.9
RHH5266_R3638
7.3
RHH5209_R3580
125.1
Terminal effector memory CD4 T-cell nTPM: 2.5
Samples: 2
Max nTPM: 3.1
Min nTPM: 1.9
RHH5243_R3615
3.1
RHH5272_R3644
1.9
Terminal effector memory CD8 T-cell nTPM: 41.5
Samples: 4
Max nTPM: 94.8
Min nTPM: 1.9
RHH5232_R3604
4.0
RHH5204_R3575
94.8
RHH5261_R3633
1.9
RHH5296_R3662
65.1
Vd2 gdTCR nTPM: 43.4
Samples: 4
Max nTPM: 99.4
Min nTPM: 2.2
RHH5234_R3606
2.2
RHH5206_R3577
99.4
RHH5263_R3635
4.7
RHH5298_R3664
67.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
