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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.7
nTPM
Monaco:
10.5
nTPM
Schmiedel:
41.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.7
HPA sample
nTPM
gdT-cell nTPM: 35.8
Samples: 6
Max nTPM: 46.3
Min nTPM: 28.5
P10809_1007
34.4
P10809_1022
42.2
P10809_1041
34.0
P10809_1060
29.2
P10809_1077
28.5
P10809_1098
46.3
MAIT T-cell nTPM: 44.6
Samples: 6
Max nTPM: 60.2
Min nTPM: 29.2
P10809_1006
29.2
P10809_1024
50.3
P10809_1043
44.7
P10809_1062
48.0
P10809_1083
35.2
P10809_1097
60.2
Memory CD4 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 48.9
Min nTPM: 35.3
P10809_1014
37.6
P10809_1026
42.5
P10809_1045
46.8
P10809_1064
43.8
P10809_1086
35.3
P10809_1113
48.9
Memory CD8 T-cell nTPM: 41.4
Samples: 5
Max nTPM: 49.3
Min nTPM: 34.2
P10809_1012
35.6
P10809_1027
34.2
P10809_1046
49.3
P10809_1065
40.7
P10809_1111
47.1
Naive CD4 T-cell nTPM: 48.6
Samples: 6
Max nTPM: 64.7
Min nTPM: 31.4
P10809_1015
36.5
P10809_1030
50.5
P10809_1049
64.7
P10809_1068
50.7
P10809_1085
31.4
P10809_1112
58.0
Naive CD8 T-cell nTPM: 45.4
Samples: 6
Max nTPM: 54.1
Min nTPM: 33.5
P10809_1016
54.1
P10809_1031
47.3
P10809_1050
43.2
P10809_1069
43.2
P10809_1087
33.5
P10809_1110
50.8
T-reg nTPM: 46.2
Samples: 6
Max nTPM: 67.9
Min nTPM: 25.4
P10809_1018
38.3
P10809_1037
67.9
P10809_1056
25.4
P10809_1075
51.4
P10809_1094
49.0
P10809_1106
45.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
10.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 7.7
Samples: 4
Max nTPM: 12.1
Min nTPM: 4.7
RHH5202_R3573
6.7
RHH5230_R3602
7.3
RHH5259_R3631
12.1
RHH5288_R3660
4.7
Effector memory CD8 T-cell nTPM: 5.6
Samples: 4
Max nTPM: 8.7
Min nTPM: 1.6
RHH5203_R3574
8.1
RHH5231_R3603
1.6
RHH5260_R3632
8.7
RHH5289_R3661
3.8
MAIT T-cell nTPM: 7.1
Samples: 4
Max nTPM: 11.8
Min nTPM: 4.5
RHH5233_R3605
4.5
RHH5205_R3576
5.1
RHH5262_R3634
11.8
RHH5297_R3663
7.1
Memory CD4 T-cell TFH nTPM: 2.5
Samples: 4
Max nTPM: 4.0
Min nTPM: 0.9
RHH5300_R3666
0.9
RHH5236_R3608
2.3
RHH5265_R3637
2.9
RHH5208_R3579
4.0
Memory CD4 T-cell Th1 nTPM: 8.1
Samples: 4
Max nTPM: 12.4
Min nTPM: 1.9
RHH5210_R3581
1.9
RHH5302_R3668
8.9
RHH5238_R3610
12.4
RHH5267_R3639
9.1
Memory CD4 T-cell Th1/Th17 nTPM: 7.8
Samples: 4
Max nTPM: 11.4
Min nTPM: 5.4
RHH5303_R3669
8.4
RHH5211_R3582
5.4
RHH5239_R3611
5.9
RHH5268_R3640
11.4
Memory CD4 T-cell Th17 nTPM: 5.1
Samples: 4
Max nTPM: 8.7
Min nTPM: 2.1
RHH5304_R3670
4.8
RHH5212_R3583
2.1
RHH5240_R3612
4.6
RHH5269_R3641
8.7
Memory CD4 T-cell Th2 nTPM: 5.8
Samples: 4
Max nTPM: 8.7
Min nTPM: 1.3
RHH5305_R3671
8.7
RHH5213_R3584
6.0
RHH5241_R3613
1.3
RHH5270_R3642
7.3
Naive CD4 T-cell nTPM: 7.7
Samples: 4
Max nTPM: 13.5
Min nTPM: 1.8
RHH5306_R3672
13.5
RHH5214_R3585
4.9
RHH5242_R3614
1.8
RHH5271_R3643
10.5
Naive CD8 T-cell nTPM: 7.3
Samples: 4
Max nTPM: 11.4
Min nTPM: 2.1
RHH5201_R3572
4.5
RHH5229_R3601
11.4
RHH5258_R3630
2.1
RHH5287_R3659
11.2
Non-Vd2 gdTCR nTPM: 6.8
Samples: 4
Max nTPM: 9.3
Min nTPM: 4.6
RHH5235_R3607
9.3
RHH5264_R3636
4.6
RHH5207_R3578
5.7
RHH5299_R3665
7.4
T-reg nTPM: 6.4
Samples: 4
Max nTPM: 10.9
Min nTPM: 1.3
RHH5301_R3667
1.3
RHH5237_R3609
2.8
RHH5266_R3638
10.4
RHH5209_R3580
10.9
Terminal effector memory CD4 T-cell nTPM: 4.7
Samples: 2
Max nTPM: 5.5
Min nTPM: 3.8
RHH5243_R3615
3.8
RHH5272_R3644
5.5
Terminal effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 13.6
Min nTPM: 1.8
RHH5232_R3604
1.8
RHH5204_R3575
13.6
RHH5261_R3633
10.6
RHH5296_R3662
4.3
Vd2 gdTCR nTPM: 10.5
Samples: 4
Max nTPM: 12.2
Min nTPM: 8.7
RHH5234_R3606
9.3
RHH5206_R3577
8.7
RHH5263_R3635
12.2
RHH5298_R3664
11.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
