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EIF3CL
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  • EIF3CL
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

EIF3CL
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Eukaryotic translation initiation factor 3 subunit C like
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p12.1
Chromosome location (bp) 28379579 - 28403841
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000205609 (version 109)
Entrez gene 728689
HGNC HGNC:26347
UniProt B5ME19 (UniProt - Evidence at protein level)
neXtProt NX_B5ME19
GeneCards EIF3CL
Antibodypedia EIF3CL antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Initiation factor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein biosynthesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a core subunit of the eukaryotic translation initiation factor 3 (eIF3) complex. The encoded protein is nearly identical to another protein, eIF3c, from a related gene. The eIF3 complex binds the 40S ribosome and mRNAs to enable translation initiation. Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Dec 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
EIF3CL-201
ENSP00000370258
ENST00000380876
B5ME19
[Direct mapping] Eukaryotic translation initiation factor 3 subunit C-like protein
Show all
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001732 [formation of cytoplasmic translation initiation complex]
GO:0002183 [cytoplasmic translational initiation]
GO:0003723 [RNA binding]
GO:0003743 [translation initiation factor activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006412 [translation]
GO:0006413 [translational initiation]
GO:0016282 [eukaryotic 43S preinitiation complex]
GO:0031369 [translation initiation factor binding]
GO:0032991 [protein-containing complex]
GO:0033290 [eukaryotic 48S preinitiation complex]
Show all
914 aa
105.5 kDa
No 0
EIF3CL-202
ENSP00000381917
ENST00000398944
B5ME19
[Direct mapping] Eukaryotic translation initiation factor 3 subunit C-like protein
Show all
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001732 [formation of cytoplasmic translation initiation complex]
GO:0002183 [cytoplasmic translational initiation]
GO:0003723 [RNA binding]
GO:0003743 [translation initiation factor activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006412 [translation]
GO:0006413 [translational initiation]
GO:0016282 [eukaryotic 43S preinitiation complex]
GO:0031369 [translation initiation factor binding]
GO:0032991 [protein-containing complex]
GO:0033290 [eukaryotic 48S preinitiation complex]
Show all
914 aa
105.5 kDa
No 0

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