HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.1 nTPM
HPA Brain:41.6 nTPM
GTEx:35.1 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:43.2 nTPM
Mouse:96.8 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041559Antibody HPA043530
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
1898 Male, age 80, left hemisphere 31.4
2529 Female, age 94, left hemisphere 29.5
2148 Female, age 91, left hemisphere 29.1
1855 Male, age 76, left hemisphere 28.8
2621 Female, age 67, right hemisphere 26.6
1911 Female, age 85, right hemisphere 26.1
Dentate gyrus
nTPM: 29.7
1927 Female, age 91, both hemispheres 33.8
2528 Male, age 74, both hemispheres 32.0
2531 Female, age 67, both hemispheres 29.2
2530 Female, age 94, left hemisphere 28.5
2246 Female, age 85, both hemispheres 27.7
2010 Male, age 76, both hemispheres 27.2
Entorhinal gyrus
nTPM: 31.9
2764 Male, age 80, right hemisphere 37.1
2613 Female, age 94, left hemisphere 35.8
1787 Male, age 76, left hemisphere 34.5
1938 Female, age 85, left hemisphere 33.6
2686 Male, age 75, right hemisphere 26.9
2117 Female, age 91, right hemisphere 23.7
Hippocampus, CA1
nTPM: 31.4
2749 Male, age 80, left hemisphere 43.3
1873 Female, age 85, both hemispheres 32.0
2082 Female, age 91, right hemisphere 29.7
2527 Male, age 74, both hemispheres 28.6
2045 Male, age 76, both hemispheres 23.3
Hippocampus, CA2
nTPM: 31.4
1892 Male, age 76, both hemispheres 35.0
1940 Female, age 85, left hemisphere 34.6
1963 Male, age 80, left hemisphere 31.8
2249 Male, age 74, both hemispheres 30.8
2437 Female, age 94, left hemisphere 28.6
2113 Female, age 91, right hemisphere 27.7
Hippocampus, CA3
nTPM: 31.9
2137 Male, age 80, left hemisphere 41.8
2620 Female, age 94, left hemisphere 35.2
1867 Male, age 76, both hemispheres 33.4
2436 Male, age 74, both hemispheres 30.3
1891 Female, age 85, both hemispheres 27.2
2861 Female, age 67, both hemispheres 23.4
Parahippocampal cortex
nTPM: 32.4
1850 Male, age 80, both hemispheres 42.6
1933 Female, age 85, both hemispheres 37.8
1990 Female, age 91, right hemisphere 34.6
2532 Female, age 72, left hemisphere 34.3
2692 Male, age 74, both hemispheres 30.4
2693 Female, age 94, both hemispheres 29.4
2245 Female, age 91, both hemispheres 29.2
2018 Male, age 76, both hemispheres 29.1
2250 Female, age 67, right hemisphere 28.5
2622 Female, age 67, right hemisphere 28.0
Perirhinal gyrus
nTPM: 41.6
1847 Female, age 91, left hemisphere 50.6
1841 Female, age 85, right hemisphere 45.1
1794 Male, age 80, right hemisphere 44.8
2521 Female, age 94, right hemisphere 34.0
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 28.0
1977 Female, age 85, both hemispheres 34.7
1901 Male, age 80, both hemispheres 32.9
2042 Male, age 76, both hemispheres 26.5
2619 Male, age 74, both hemispheres 26.0
2729 Female, age 91, right hemisphere 24.9
2438 Female, age 94, left hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.1
Samples: 197

Max nTPM: 83.2
Min nTPM: 18.8
Std nTPM: 10.4
Median nTPM: 33.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 67.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 58.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 58.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 56.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 54.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 53.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 52.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.7
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 30.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.2
Pig sample Sample description nTPM
Subiculum
nTPM: 36.5
Samples: 4

Max nTPM: 42.3
Min nTPM: 31.6
Sample A Female 42.3
Sample B Female 39.8
Sample C Male 31.6
Sample D Male 32.1
Dorsal hippocampus
nTPM: 43.3
Samples: 4

Max nTPM: 51.9
Min nTPM: 35.8
Sample A Female 51.9
Sample B Female 48.6
Sample C Male 36.7
Sample D Male 35.8
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 37.4
Min nTPM: 27.5
Sample A Female 35.5
Sample B Female 37.4
Sample C Male 31.0
Sample D Male 27.5
Ventral hippocampus
nTPM: 38.7
Samples: 4

Max nTPM: 45.4
Min nTPM: 30.5
Sample A Female 37.8
Sample B Female 30.5
Sample C Male 40.9
Sample D Male 45.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 96.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.1
Samples: 4

Max nTPM: 94.2
Min nTPM: 83.3
Sample A Male 83.3
Sample B Male 89.2
Sample C Female 93.8
Sample D Female 94.2
Hippocampal formation
nTPM: 96.8
Samples: 4

Max nTPM: 104.4
Min nTPM: 91.5
Sample A Male 104.4
Sample B Male 91.5
Sample C Female 99.3
Sample D Female 92.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
68077015 Antisense, RP_040929_01_C08, Mouse strain C57BL/6J (56 days, male) 3.9

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