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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
42.4
nTPM
FANTOM5:
25.7
Scaled Tags Per Million
Pig:
57.5
nTPM
Mouse:
116.2
nTPM
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
42.4
Sample id
Sample description
nTPM
Hippocampus nTPM: 34.9
2621
Female, age 67, right hemisphere
40.4
1911
Female, age 85, right hemisphere
39.4
1898
Male, age 80, left hemisphere
36.6
2529
Female, age 94, left hemisphere
33.7
2148
Female, age 91, left hemisphere
30.4
1855
Male, age 76, left hemisphere
29.2
Dentate gyrus nTPM: 30.3
1927
Female, age 91, both hemispheres
35.8
2246
Female, age 85, both hemispheres
30.9
2530
Female, age 94, left hemisphere
30.8
2531
Female, age 67, both hemispheres
29.3
2010
Male, age 76, both hemispheres
29.2
2528
Male, age 74, both hemispheres
26.0
Entorhinal gyrus nTPM: 35.0
2613
Female, age 94, left hemisphere
58.0
1938
Female, age 85, left hemisphere
33.3
1787
Male, age 76, left hemisphere
32.8
2686
Male, age 75, right hemisphere
32.0
2764
Male, age 80, right hemisphere
29.6
2117
Female, age 91, right hemisphere
24.3
Hippocampus, CA1 nTPM: 42.4
2749
Male, age 80, left hemisphere
86.7
2527
Male, age 74, both hemispheres
37.9
1873
Female, age 85, both hemispheres
32.5
2082
Female, age 91, right hemisphere
32.3
2045
Male, age 76, both hemispheres
22.8
Hippocampus, CA2 nTPM: 32.9
1963
Male, age 80, left hemisphere
41.8
1892
Male, age 76, both hemispheres
39.3
2249
Male, age 74, both hemispheres
30.1
2113
Female, age 91, right hemisphere
30.0
2437
Female, age 94, left hemisphere
29.3
1940
Female, age 85, left hemisphere
26.7
Hippocampus, CA3 nTPM: 38.7
2137
Male, age 80, left hemisphere
67.9
2861
Female, age 67, both hemispheres
44.8
2620
Female, age 94, left hemisphere
35.9
1867
Male, age 76, both hemispheres
33.5
2436
Male, age 74, both hemispheres
25.1
1891
Female, age 85, both hemispheres
24.8
Parahippocampal cortex nTPM: 31.8
2245
Female, age 91, both hemispheres
45.3
2622
Female, age 67, right hemisphere
38.1
2250
Female, age 67, right hemisphere
34.1
1933
Female, age 85, both hemispheres
33.5
2692
Male, age 74, both hemispheres
33.1
2693
Female, age 94, both hemispheres
28.6
2018
Male, age 76, both hemispheres
27.9
1990
Female, age 91, right hemisphere
27.6
1850
Male, age 80, both hemispheres
26.6
2532
Female, age 72, left hemisphere
23.3
Perirhinal gyrus nTPM: 34.5
1847
Female, age 91, left hemisphere
44.3
2521
Female, age 94, right hemisphere
37.1
1794
Male, age 80, right hemisphere
34.1
1841
Female, age 85, right hemisphere
29.5
2848
Male, age 76, right hemisphere
27.3
Subiculum nTPM: 32.5
1901
Male, age 80, both hemispheres
41.7
2438
Female, age 94, left hemisphere
36.3
2042
Male, age 76, both hemispheres
33.4
2619
Male, age 74, both hemispheres
31.6
1977
Female, age 85, both hemispheres
28.2
2729
Female, age 91, right hemisphere
23.8
HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
