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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
196.6
nTPM
Monaco:
281.3
nTPM
Schmiedel:
107.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.6
HPA sample
nTPM
gdT-cell nTPM: 169.9
Samples: 6
Max nTPM: 202.8
Min nTPM: 116.2
P10809_1007
116.2
P10809_1022
196.8
P10809_1041
202.8
P10809_1060
167.9
P10809_1077
161.6
P10809_1098
173.9
MAIT T-cell nTPM: 168.0
Samples: 6
Max nTPM: 192.3
Min nTPM: 134.4
P10809_1006
134.4
P10809_1024
192.3
P10809_1043
180.8
P10809_1062
171.0
P10809_1083
154.8
P10809_1097
174.8
Memory CD4 T-cell nTPM: 162.7
Samples: 6
Max nTPM: 189.6
Min nTPM: 135.2
P10809_1014
135.2
P10809_1026
181.5
P10809_1045
178.9
P10809_1064
149.7
P10809_1086
141.2
P10809_1113
189.6
Memory CD8 T-cell nTPM: 172.9
Samples: 5
Max nTPM: 219.9
Min nTPM: 140.0
P10809_1012
140.0
P10809_1027
169.1
P10809_1046
219.9
P10809_1065
151.5
P10809_1111
183.9
Naive CD4 T-cell nTPM: 153.8
Samples: 6
Max nTPM: 183.0
Min nTPM: 111.5
P10809_1015
111.5
P10809_1030
148.4
P10809_1049
183.0
P10809_1068
167.8
P10809_1085
135.1
P10809_1112
176.8
Naive CD8 T-cell nTPM: 162.5
Samples: 6
Max nTPM: 208.9
Min nTPM: 114.0
P10809_1016
114.0
P10809_1031
179.8
P10809_1050
158.3
P10809_1069
165.5
P10809_1087
148.5
P10809_1110
208.9
T-reg nTPM: 196.6
Samples: 6
Max nTPM: 258.6
Min nTPM: 149.8
P10809_1018
149.8
P10809_1037
161.5
P10809_1056
258.6
P10809_1075
182.0
P10809_1094
212.5
P10809_1106
215.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
281.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 219.2
Samples: 4
Max nTPM: 251.2
Min nTPM: 178.2
RHH5202_R3573
243.1
RHH5230_R3602
251.2
RHH5259_R3631
178.2
RHH5288_R3660
204.2
Effector memory CD8 T-cell nTPM: 266.8
Samples: 4
Max nTPM: 304.5
Min nTPM: 235.6
RHH5203_R3574
258.8
RHH5231_R3603
268.4
RHH5260_R3632
235.6
RHH5289_R3661
304.5
MAIT T-cell nTPM: 224.4
Samples: 4
Max nTPM: 248.3
Min nTPM: 187.0
RHH5233_R3605
218.4
RHH5205_R3576
248.3
RHH5262_R3634
243.9
RHH5297_R3663
187.0
Memory CD4 T-cell TFH nTPM: 243.1
Samples: 4
Max nTPM: 274.7
Min nTPM: 199.1
RHH5300_R3666
199.1
RHH5236_R3608
262.7
RHH5265_R3637
235.9
RHH5208_R3579
274.7
Memory CD4 T-cell Th1 nTPM: 202.8
Samples: 4
Max nTPM: 224.3
Min nTPM: 172.0
RHH5210_R3581
221.1
RHH5302_R3668
193.9
RHH5238_R3610
172.0
RHH5267_R3639
224.3
Memory CD4 T-cell Th1/Th17 nTPM: 235.3
Samples: 4
Max nTPM: 276.9
Min nTPM: 163.2
RHH5303_R3669
265.4
RHH5211_R3582
276.9
RHH5239_R3611
163.2
RHH5268_R3640
235.6
Memory CD4 T-cell Th17 nTPM: 252.9
Samples: 4
Max nTPM: 269.2
Min nTPM: 227.9
RHH5304_R3670
250.3
RHH5212_R3583
269.2
RHH5240_R3612
264.2
RHH5269_R3641
227.9
Memory CD4 T-cell Th2 nTPM: 226.8
Samples: 4
Max nTPM: 263.6
Min nTPM: 197.2
RHH5305_R3671
197.2
RHH5213_R3584
263.6
RHH5241_R3613
239.1
RHH5270_R3642
207.2
Naive CD4 T-cell nTPM: 202.5
Samples: 4
Max nTPM: 229.1
Min nTPM: 183.1
RHH5306_R3672
200.8
RHH5214_R3585
229.1
RHH5242_R3614
183.1
RHH5271_R3643
196.8
Naive CD8 T-cell nTPM: 216.3
Samples: 4
Max nTPM: 292.7
Min nTPM: 146.9
RHH5201_R3572
292.7
RHH5229_R3601
146.9
RHH5258_R3630
209.4
RHH5287_R3659
216.2
Non-Vd2 gdTCR nTPM: 281.3
Samples: 4
Max nTPM: 325.0
Min nTPM: 228.5
RHH5235_R3607
325.0
RHH5264_R3636
306.7
RHH5207_R3578
265.0
RHH5299_R3665
228.5
T-reg nTPM: 223.3
Samples: 4
Max nTPM: 275.4
Min nTPM: 181.9
RHH5301_R3667
202.8
RHH5237_R3609
275.4
RHH5266_R3638
181.9
RHH5209_R3580
232.9
Terminal effector memory CD4 T-cell nTPM: 247.6
Samples: 2
Max nTPM: 259.1
Min nTPM: 236.0
RHH5243_R3615
259.1
RHH5272_R3644
236.0
Terminal effector memory CD8 T-cell nTPM: 250.0
Samples: 4
Max nTPM: 254.6
Min nTPM: 243.7
RHH5232_R3604
254.6
RHH5204_R3575
254.5
RHH5261_R3633
243.7
RHH5296_R3662
247.0
Vd2 gdTCR nTPM: 239.5
Samples: 4
Max nTPM: 269.2
Min nTPM: 190.5
RHH5234_R3606
248.0
RHH5206_R3577
250.3
RHH5263_R3635
269.2
RHH5298_R3664
190.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.