HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:28.4 nTPM
HPA Brain:16.6 nTPM
GTEx:28.4 nTPM
FANTOM5:93.0 Scaled Tags Per Million
Pig:29.1 nTPM
Mouse:40.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037782
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
1898 Male, age 80, left hemisphere 17.1
2529 Female, age 94, left hemisphere 13.8
1911 Female, age 85, right hemisphere 13.6
1855 Male, age 76, left hemisphere 12.9
2148 Female, age 91, left hemisphere 11.6
2621 Female, age 67, right hemisphere 10.8
Dentate gyrus
nTPM: 13.1
2010 Male, age 76, both hemispheres 14.4
2530 Female, age 94, left hemisphere 13.9
1927 Female, age 91, both hemispheres 13.8
2528 Male, age 74, both hemispheres 13.3
2246 Female, age 85, both hemispheres 12.3
2531 Female, age 67, both hemispheres 10.9
Entorhinal gyrus
nTPM: 12.8
1938 Female, age 85, left hemisphere 17.3
2764 Male, age 80, right hemisphere 13.7
1787 Male, age 76, left hemisphere 12.1
2686 Male, age 75, right hemisphere 11.9
2613 Female, age 94, left hemisphere 11.3
2117 Female, age 91, right hemisphere 10.6
Hippocampus, CA1
nTPM: 15.0
1873 Female, age 85, both hemispheres 17.1
2749 Male, age 80, left hemisphere 16.5
2045 Male, age 76, both hemispheres 15.6
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 10.5
Hippocampus, CA2
nTPM: 14.3
1892 Male, age 76, both hemispheres 18.9
2249 Male, age 74, both hemispheres 17.0
1963 Male, age 80, left hemisphere 14.1
2437 Female, age 94, left hemisphere 12.9
1940 Female, age 85, left hemisphere 12.2
2113 Female, age 91, right hemisphere 10.9
Hippocampus, CA3
nTPM: 13.8
1867 Male, age 76, both hemispheres 16.5
1891 Female, age 85, both hemispheres 14.9
2436 Male, age 74, both hemispheres 14.7
2137 Male, age 80, left hemisphere 14.0
2861 Female, age 67, both hemispheres 11.9
2620 Female, age 94, left hemisphere 11.0
Parahippocampal cortex
nTPM: 13.6
1850 Male, age 80, both hemispheres 17.2
2532 Female, age 72, left hemisphere 15.1
2245 Female, age 91, both hemispheres 14.9
1933 Female, age 85, both hemispheres 14.5
2693 Female, age 94, both hemispheres 14.1
1990 Female, age 91, right hemisphere 13.9
2250 Female, age 67, right hemisphere 13.5
2018 Male, age 76, both hemispheres 12.4
2692 Male, age 74, both hemispheres 11.8
2622 Female, age 67, right hemisphere 8.7
Perirhinal gyrus
nTPM: 16.6
1841 Female, age 85, right hemisphere 18.4
1847 Female, age 91, left hemisphere 18.4
1794 Male, age 80, right hemisphere 17.6
2521 Female, age 94, right hemisphere 15.9
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 13.4
2438 Female, age 94, left hemisphere 15.9
1901 Male, age 80, both hemispheres 15.4
1977 Female, age 85, both hemispheres 14.1
2042 Male, age 76, both hemispheres 12.0
2729 Female, age 91, right hemisphere 11.6
2619 Male, age 74, both hemispheres 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 80.6
Min nTPM: 11.6
Std nTPM: 8.4
Median nTPM: 27.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 80.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 58.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 45.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 43.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 42.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 42.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 42.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 41.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 41.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.0
FF:10169-103B7 60 years, female 122.5
FF:10153-102I9 76 years, female 63.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.1
Pig sample Sample description nTPM
Subiculum
nTPM: 26.6
Samples: 4

Max nTPM: 33.6
Min nTPM: 23.4
Sample A Female 33.6
Sample B Female 24.6
Sample C Male 23.4
Sample D Male 24.6
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 32.7
Min nTPM: 26.4
Sample A Female 32.7
Sample B Female 27.6
Sample C Male 29.0
Sample D Male 26.4
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 38.6
Min nTPM: 24.7
Sample A Female 27.1
Sample B Female 38.6
Sample C Male 26.0
Sample D Male 24.7
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 20.6
Sample A Female 30.0
Sample B Female 23.5
Sample C Male 24.3
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.9
Samples: 4

Max nTPM: 51.2
Min nTPM: 30.2
Sample A Male 45.5
Sample B Male 51.2
Sample C Female 36.8
Sample D Female 30.2
Hippocampal formation
nTPM: 39.0
Samples: 4

Max nTPM: 43.0
Min nTPM: 31.0
Sample A Male 39.9
Sample B Male 42.2
Sample C Female 31.0
Sample D Female 43.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70474881 Antisense, RP_050623_01_C05, Mouse strain C57BL/6J (56 days, male) 0.1

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