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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.7
nTPM
Monaco:
39.1
nTPM
Schmiedel:
21.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.7
HPA sample
nTPM
gdT-cell nTPM: 33.8
Samples: 6
Max nTPM: 35.8
Min nTPM: 28.0
P10809_1007
34.9
P10809_1022
34.0
P10809_1041
35.7
P10809_1060
28.0
P10809_1077
34.5
P10809_1098
35.8
MAIT T-cell nTPM: 39.7
Samples: 6
Max nTPM: 47.5
Min nTPM: 31.6
P10809_1006
31.6
P10809_1024
47.5
P10809_1043
38.4
P10809_1062
34.3
P10809_1083
39.2
P10809_1097
47.0
Memory CD4 T-cell nTPM: 38.6
Samples: 6
Max nTPM: 43.3
Min nTPM: 35.3
P10809_1014
35.3
P10809_1026
37.2
P10809_1045
38.5
P10809_1064
35.7
P10809_1086
43.3
P10809_1113
41.3
Memory CD8 T-cell nTPM: 34.9
Samples: 5
Max nTPM: 40.8
Min nTPM: 29.9
P10809_1012
30.6
P10809_1027
29.9
P10809_1046
34.5
P10809_1065
38.6
P10809_1111
40.8
Naive CD4 T-cell nTPM: 39.8
Samples: 6
Max nTPM: 44.8
Min nTPM: 32.3
P10809_1015
42.3
P10809_1030
32.3
P10809_1049
43.5
P10809_1068
40.6
P10809_1085
35.5
P10809_1112
44.8
Naive CD8 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 48.4
Min nTPM: 35.9
P10809_1016
43.6
P10809_1031
48.4
P10809_1050
37.4
P10809_1069
35.9
P10809_1087
40.8
P10809_1110
37.9
T-reg nTPM: 34.9
Samples: 6
Max nTPM: 54.2
Min nTPM: 22.5
P10809_1018
22.5
P10809_1037
54.2
P10809_1056
39.8
P10809_1075
27.6
P10809_1094
28.6
P10809_1106
36.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.1
Samples: 4
Max nTPM: 56.0
Min nTPM: 29.0
RHH5202_R3573
56.0
RHH5230_R3602
29.0
RHH5259_R3631
32.3
RHH5288_R3660
39.2
Effector memory CD8 T-cell nTPM: 31.9
Samples: 4
Max nTPM: 34.5
Min nTPM: 25.8
RHH5203_R3574
34.5
RHH5231_R3603
32.8
RHH5260_R3632
25.8
RHH5289_R3661
34.3
MAIT T-cell nTPM: 31.9
Samples: 4
Max nTPM: 40.1
Min nTPM: 27.5
RHH5233_R3605
32.1
RHH5205_R3576
27.5
RHH5262_R3634
40.1
RHH5297_R3663
27.7
Memory CD4 T-cell TFH nTPM: 34.1
Samples: 4
Max nTPM: 47.5
Min nTPM: 24.3
RHH5300_R3666
25.3
RHH5236_R3608
47.5
RHH5265_R3637
24.3
RHH5208_R3579
39.2
Memory CD4 T-cell Th1 nTPM: 30.4
Samples: 4
Max nTPM: 35.1
Min nTPM: 23.9
RHH5210_R3581
23.9
RHH5302_R3668
31.2
RHH5238_R3610
35.1
RHH5267_R3639
31.4
Memory CD4 T-cell Th1/Th17 nTPM: 33.6
Samples: 4
Max nTPM: 58.7
Min nTPM: 21.0
RHH5303_R3669
58.7
RHH5211_R3582
27.0
RHH5239_R3611
21.0
RHH5268_R3640
27.5
Memory CD4 T-cell Th17 nTPM: 29.0
Samples: 4
Max nTPM: 39.9
Min nTPM: 20.4
RHH5304_R3670
39.9
RHH5212_R3583
34.5
RHH5240_R3612
20.4
RHH5269_R3641
21.1
Memory CD4 T-cell Th2 nTPM: 26.9
Samples: 4
Max nTPM: 34.1
Min nTPM: 20.0
RHH5305_R3671
30.1
RHH5213_R3584
23.5
RHH5241_R3613
20.0
RHH5270_R3642
34.1
Naive CD4 T-cell nTPM: 29.6
Samples: 4
Max nTPM: 41.8
Min nTPM: 22.3
RHH5306_R3672
41.8
RHH5214_R3585
28.5
RHH5242_R3614
22.3
RHH5271_R3643
25.7
Naive CD8 T-cell nTPM: 29.9
Samples: 4
Max nTPM: 38.7
Min nTPM: 18.9
RHH5201_R3572
38.2
RHH5229_R3601
23.8
RHH5258_R3630
38.7
RHH5287_R3659
18.9
Non-Vd2 gdTCR nTPM: 30.0
Samples: 4
Max nTPM: 42.5
Min nTPM: 18.1
RHH5235_R3607
18.1
RHH5264_R3636
31.5
RHH5207_R3578
42.5
RHH5299_R3665
28.0
T-reg nTPM: 30.8
Samples: 4
Max nTPM: 35.7
Min nTPM: 26.8
RHH5301_R3667
26.8
RHH5237_R3609
35.7
RHH5266_R3638
31.9
RHH5209_R3580
28.6
Terminal effector memory CD4 T-cell nTPM: 35.3
Samples: 2
Max nTPM: 42.4
Min nTPM: 28.2
RHH5243_R3615
28.2
RHH5272_R3644
42.4
Terminal effector memory CD8 T-cell nTPM: 24.3
Samples: 4
Max nTPM: 30.9
Min nTPM: 14.7
RHH5232_R3604
24.0
RHH5204_R3575
30.9
RHH5261_R3633
14.7
RHH5296_R3662
27.4
Vd2 gdTCR nTPM: 26.7
Samples: 4
Max nTPM: 32.9
Min nTPM: 18.7
RHH5234_R3606
22.8
RHH5206_R3577
32.9
RHH5263_R3635
18.7
RHH5298_R3664
32.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
