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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
413.8
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max nTPM
413.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 277.4
2301
Female, age 85, both hemispheres
364.6
2090
Male, age 80, both hemispheres
298.4
2188
Female, age 91, both hemispheres
272.0
1984
Male, age 76, both hemispheres
174.5
Dorsal cochlear nucleus nTPM: 261.7
2378
Male, age 80, both hemispheres
426.4
2802
Male, age 74, right hemisphere
268.9
2187
Female, age 91, both hemispheres
222.3
2058
Male, age 76, both hemispheres
196.4
2370
Male, age 61, both hemispheres
194.4
Dorsal tegmental nucleus nTPM: 283.2
2326
Male, age 74, both hemispheres
477.5
2358
Male, age 61, both hemispheres
257.2
1936
Male, age 76, left hemisphere
203.8
2083
Male, age 80, both hemispheres
194.2
Dorsolateral tegmental area nTPM: 177.3
2751
Female, age 85, both hemispheres
303.1
2360
Male, age 74, both hemispheres
194.0
2654
Male, age 80, both hemispheres
189.9
2337
Male, age 61, both hemispheres
114.9
2141
Male, age 76, both hemispheres
84.8
Kolliker-Fuse nucleus nTPM: 197.3
2315
Male, age 76, right hemisphere
271.6
2163
Male, age 80, both hemispheres
174.5
2793
Female, age 91, left hemisphere
145.8
Lateral lemniscal nuclei nTPM: 155.2
2169
Male, age 76, both hemispheres
196.7
2453
Male, age 74, right hemisphere
164.9
2746
Female, age 85, left hemisphere
164.9
2320
Female, age 91, left hemisphere
129.4
2036
Male, age 80, both hemispheres
120.0
Lateral parabrachial nucleus nTPM: 217.3
2792
Male, age 76, both hemispheres
371.8
2139
Female, age 85, right hemisphere
214.8
2013
Male, age 80, both hemispheres
195.5
2790
Male, age 61, both hemispheres
87.2
Lateral vestibular nucleus nTPM: 228.9
2184
Male, age 76, both hemispheres
237.7
2311
Male, age 80, both hemispheres
220.0
Locus coeruleus nTPM: 189.4
2720
Male, age 74, both hemispheres
519.4
2317
Female, age 72, unknown
220.1
2014
Male, age 55, unknown
159.7
2788
Male, age 74, unknown
151.7
2162
Male, age 80, both hemispheres
133.0
1980
Male, age 76, both hemispheres
78.8
2123
Female, age 91, both hemispheres
62.8
Medial parabrachial nucleus nTPM: 200.9
2463
Female, age 85, right hemisphere
291.6
2786
Male, age 76, both hemispheres
235.1
2170
Female, age 91, both hemispheres
206.7
2854
Male, age 80, both hemispheres
199.5
2156
Male, age 61, both hemispheres
71.3
Medial periolivary nuclei nTPM: 200.6
2458
Female, age 91, both hemispheres
431.3
2063
Male, age 76, both hemispheres
165.9
2081
Male, age 80, both hemispheres
153.4
2791
Male, age 74, right hemisphere
137.5
2171
Female, age 85, both hemispheres
115.0
Motor facial nucleus nTPM: 253.7
2795
Female, age 91, both hemispheres
422.0
2697
Female, age 85, both hemispheres
373.1
2327
Male, age 80, both hemispheres
259.9
2062
Male, age 76, both hemispheres
198.6
2126
Male, age 61, both hemispheres
134.7
2365
Male, age 74, right hemisphere
134.0
Motor trigeminal nucleus nTPM: 211.4
2321
Female, age 91, both hemispheres
327.0
2560
Male, age 74, both hemispheres
233.1
2309
Male, age 76, both hemispheres
216.3
2079
Male, age 80, both hemispheres
160.8
2335
Male, age 61, both hemispheres
120.0
Nuclei of the trapezoid body nTPM: 156.1
2166
Male, age 80, both hemispheres
220.4
2368
Female, age 91, both hemispheres
193.7
1983
Male, age 76, both hemispheres
180.1
2159
Male, age 61, both hemispheres
114.9
2735
Female, age 85, both hemispheres
71.2
Nucleus raphe magnus nTPM: 227.5
2459
Female, age 91, both hemispheres
567.0
2328
Male, age 80, both hemispheres
275.0
2455
Male, age 74, both hemispheres
142.3
2051
Male, age 76, both hemispheres
130.3
2160
Male, age 61, both hemispheres
127.8
2172
Female, age 85, both hemispheres
122.8
Paramedian reticular nucleus nTPM: 286.6
2050
Female, age 85, both hemispheres
602.8
2313
Male, age 61, both hemispheres
197.4
2057
Male, age 80, both hemispheres
173.4
2052
Male, age 76, both hemispheres
172.8
Pedunculopontine tegmental nucleus nTPM: 174.7
2334
Male, age 80, both hemispheres
312.5
1921
Female, age 85, both hemispheres
132.0
2338
Male, age 61, both hemispheres
79.6
Pontine nuclei nTPM: 165.1
2319
Female, age 91, both hemispheres
224.0
1968
Male, age 76, left hemisphere
195.7
1863
Male, age 55, unknown
184.5
2454
Male, age 74, left hemisphere
168.9
2109
Female, age 72, unknown
157.4
2787
Female, age 85, both hemispheres
145.5
2115
Male, age 80, left hemisphere
143.7
2727
Male, age 61, right hemisphere
101.0
Pontine raphe nucleus nTPM: 231.9
2122
Female, age 85, midline
284.8
2853
Male, age 76, midline
179.0
Posteroventral cochlear nucleus nTPM: 252.1
2752
Female, age 85, both hemispheres
530.6
2135
Female, age 91, both hemispheres
268.4
2341
Male, age 80, both hemispheres
182.9
2371
Male, age 61, both hemispheres
141.0
2070
Male, age 76, both hemispheres
137.8
Principal sensory trigeminal nucleus nTPM: 162.0
2324
Male, age 76, both hemispheres
275.2
2158
Male, age 61, both hemispheres
132.8
2367
Female, age 91, left hemisphere
122.2
2008
Male, age 80, left hemisphere
117.8
Reticular pontine nucleus, caudal nTPM: 277.5
2457
Female, age 91, both hemispheres
395.9
2559
Male, age 74, both hemispheres
379.2
2092
Male, age 76, both hemispheres
185.9
2332
Male, age 80, right hemisphere
149.0
Reticular pontine nucleus, oral nTPM: 216.8
2366
Female, age 91, both hemispheres
317.6
2012
Female, age 85, both hemispheres
266.4
2167
Male, age 76, both hemispheres
177.0
1939
Male, age 80, both hemispheres
163.2
2361
Male, age 74, both hemispheres
159.6
Reticulotegmental nucleus nTPM: 261.2
2452
Male, age 74, both hemispheres
384.2
2325
Male, age 76, both hemispheres
254.7
2322
Female, age 91, both hemispheres
219.1
2333
Male, age 80, both hemispheres
186.7
Spinal trigeminal nucleus, oral nTPM: 413.8
1978
Male, age 76, both hemispheres
625.3
2164
Male, age 80, both hemispheres
362.3
2737
Female, age 85, both hemispheres
253.7
Subcoeruleus area nTPM: 255.4
2451
Male, age 74, both hemispheres
346.1
2369
Female, age 85, left hemisphere
319.9
2089
Male, age 76, left hemisphere
270.8
1958
Male, age 80, both hemispheres
191.5
2323
Female, age 91, left hemisphere
148.8
Superior olive nTPM: 235.2
2329
Male, age 80, right hemisphere
356.3
2020
Male, age 76, both hemispheres
279.4
2561
Female, age 91, both hemispheres
234.7
2364
Male, age 74, right hemisphere
218.3
1875
Female, age 85, both hemispheres
87.6
Ventral periolivary nuclei nTPM: 205.6
2794
Female, age 91, left hemisphere
365.4
2023
Male, age 76, both hemispheres
211.0
2165
Male, age 80, both hemispheres
152.9
2130
Female, age 85, both hemispheres
93.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 312.4
2161
Male, age 80, both hemispheres
666.5
2456
Female, age 91, both hemispheres
428.4
2359
Male, age 61, both hemispheres
288.9
1959
Male, age 76, both hemispheres
183.0
2840
Female, age 85, both hemispheres
163.2
2449
Male, age 74, both hemispheres
144.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
