MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:26.5 nTPM
FANTOM5:0.0 Scaled Tags Per Million

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 26.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 26.5
2586 Male, age 75, left hemisphere 31.3
2219 Male, age 76, both hemispheres 27.8
1833 Male, age 53, unknown 27.6
1830 Male, age 51, unknown 27.3
2019 Male, age 18, unknown 26.3
1827 Male, age 72, unknown 25.6
2666 Male, age 74, left hemisphere 25.6
2411 Female, age 72, unknown 25.3
2828 Female, age 72, unknown 24.3
1870 Female, age 42, unknown 24.2
Dorsal raphe nucleus
nTPM: 22.9
2016 Female, age 72, unknown 23.5
2047 Male, age 72, unknown 23.1
1828 Male, age 53, unknown 22.8
2750 Male, age 76, both hemispheres 22.8
2298 Female, age 72, unknown 22.1
Inferior colliculus
nTPM: 24.6
2849 Male, age 72, unknown 26.8
1848 Female, age 42, unknown 24.6
2097 Female, age 72, unknown 23.8
1890 Male, age 53, unknown 23.0
Median raphe nucleus
nTPM: 20.6
2220 Male, age 76, midline 20.6
Periaquaductal grey, anterior
nTPM: 26.2
1947 Male, age 18, unknown 29.3
2502 Female, age 75, unknown 27.5
1795 Male, age 51, unknown 21.7
Periaquaductal grey, dorsal
nTPM: 24.1
1831 Male, age 72, unknown 25.5
1840 Male, age 53, unknown 25.1
2464 Female, age 72, unknown 25.0
2850 Male, age 76, both hemispheres 20.6
Periaquaductal grey, lateral
nTPM: 23.9
2053 Male, age 18, unknown 25.0
2140 Male, age 76, both hemispheres 23.9
2272 Male, age 74, both hemispheres 22.6
Pretectal area
nTPM: 25.0
2007 Male, age 72, unknown 31.2
1817 Female, age 42, unknown 27.1
2407 Male, age 75, both hemispheres 26.5
1816 Male, age 51, unknown 25.5
2224 Female, age 72, unknown 25.0
2825 Male, age 18, unknown 24.7
1944 Female, age 72, unknown 24.3
2273 Male, age 74, both hemispheres 24.1
2667 Female, age 75, unknown 23.6
1815 Male, age 53, unknown 22.4
2316 Male, age 76, right hemisphere 20.3
Red nucleus
nTPM: 24.1
2823 Male, age 76, right hemisphere 29.4
1865 Male, age 51, unknown 28.2
2588 Male, age 74, left hemisphere 27.9
2584 Male, age 75, left hemisphere 27.5
1904 Male, age 53, unknown 25.3
2503 Female, age 72, unknown 22.9
2785 Male, age 18, unknown 22.9
2769 Male, age 72, unknown 22.2
2227 Male, age 72, unknown 21.9
1954 Female, age 42, unknown 21.7
1821 Female, age 72, unknown 21.0
2725 Female, age 75, unknown 17.8
Substantia nigra
nTPM: 22.4
2583 Male, age 75, right hemisphere 29.2
1941 Male, age 53, unknown 27.7
1916 Female, age 42, unknown 23.3
2665 Male, age 74, both hemispheres 23.3
2590 Female, age 75, unknown 22.9
1889 Female, age 72, unknown 22.8
1851 Male, age 51, unknown 20.9
2699 Male, age 18, unknown 20.9
2241 Male, age 72, unknown 20.1
2409 Female, age 72, unknown 12.6
Superior colliculus
nTPM: 26.2
2668 Female, age 75, unknown 33.0
1895 Male, age 76, right hemisphere 30.8
1839 Male, age 51, unknown 28.3
2664 Male, age 75, both hemispheres 27.5
2087 Female, age 72, unknown 27.2
2261 Male, age 18, unknown 24.2
1913 Female, age 42, unknown 24.0
1995 Male, age 72, unknown 23.2
1796 Male, age 53, unknown 22.7
2587 Male, age 74, left hemisphere 21.4
Ventral tegmental area
nTPM: 23.0
2223 Female, age 72, unknown 25.7
2410 Female, age 72, unknown 25.3
2218 Male, age 76, both hemispheres 24.3
2021 Male, age 53, unknown 21.2
1942 Male, age 51, unknown 21.1
1915 Female, age 42, unknown 20.5

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 0.0
FF:10158-103A5 76 years, female 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org