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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
367.8
nTPM
Monaco:
762.4
nTPM
Schmiedel:
33.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
367.8
HPA sample
nTPM
gdT-cell nTPM: 367.8
Samples: 6
Max nTPM: 795.3
Min nTPM: 140.8
P10809_1007
154.0
P10809_1022
168.5
P10809_1041
283.8
P10809_1060
664.2
P10809_1077
795.3
P10809_1098
140.8
MAIT T-cell nTPM: 94.9
Samples: 6
Max nTPM: 145.7
Min nTPM: 59.6
P10809_1006
84.0
P10809_1024
88.5
P10809_1043
112.3
P10809_1062
145.7
P10809_1083
59.6
P10809_1097
79.1
Memory CD4 T-cell nTPM: 33.5
Samples: 6
Max nTPM: 154.1
Min nTPM: 2.0
P10809_1014
9.4
P10809_1026
2.0
P10809_1045
10.6
P10809_1064
154.1
P10809_1086
20.5
P10809_1113
4.1
Memory CD8 T-cell nTPM: 142.0
Samples: 5
Max nTPM: 268.7
Min nTPM: 62.1
P10809_1012
62.1
P10809_1027
68.5
P10809_1046
268.7
P10809_1065
244.6
P10809_1111
66.0
Naive CD4 T-cell nTPM: 3.1
Samples: 6
Max nTPM: 10.1
Min nTPM: 0.0
P10809_1015
0.0
P10809_1030
0.0
P10809_1049
2.9
P10809_1068
1.6
P10809_1085
10.1
P10809_1112
3.9
Naive CD8 T-cell nTPM: 81.2
Samples: 6
Max nTPM: 207.2
Min nTPM: 9.6
P10809_1016
9.6
P10809_1031
88.7
P10809_1050
111.0
P10809_1069
59.2
P10809_1087
207.2
P10809_1110
11.4
T-reg nTPM: 1.9
Samples: 6
Max nTPM: 5.3
Min nTPM: 0.0
P10809_1018
1.8
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
5.3
P10809_1094
4.2
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
762.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.6
Samples: 4
Max nTPM: 110.2
Min nTPM: 21.2
RHH5202_R3573
21.2
RHH5230_R3602
38.7
RHH5259_R3631
110.2
RHH5288_R3660
68.4
Effector memory CD8 T-cell nTPM: 203.3
Samples: 4
Max nTPM: 283.5
Min nTPM: 102.7
RHH5203_R3574
283.5
RHH5231_R3603
198.8
RHH5260_R3632
228.0
RHH5289_R3661
102.7
MAIT T-cell nTPM: 298.2
Samples: 4
Max nTPM: 418.7
Min nTPM: 75.3
RHH5233_R3605
75.3
RHH5205_R3576
411.5
RHH5262_R3634
418.7
RHH5297_R3663
287.4
Memory CD4 T-cell TFH nTPM: 10.2
Samples: 4
Max nTPM: 23.8
Min nTPM: 0.0
RHH5300_R3666
0.0
RHH5236_R3608
0.0
RHH5265_R3637
23.8
RHH5208_R3579
17.1
Memory CD4 T-cell Th1 nTPM: 18.4
Samples: 4
Max nTPM: 43.9
Min nTPM: 0.0
RHH5210_R3581
0.0
RHH5302_R3668
0.0
RHH5238_R3610
29.5
RHH5267_R3639
43.9
Memory CD4 T-cell Th1/Th17 nTPM: 49.0
Samples: 4
Max nTPM: 89.1
Min nTPM: 27.1
RHH5303_R3669
29.4
RHH5211_R3582
27.1
RHH5239_R3611
50.3
RHH5268_R3640
89.1
Memory CD4 T-cell Th17 nTPM: 48.4
Samples: 4
Max nTPM: 89.4
Min nTPM: 13.9
RHH5304_R3670
89.4
RHH5212_R3583
30.8
RHH5240_R3612
13.9
RHH5269_R3641
59.3
Memory CD4 T-cell Th2 nTPM: 34.6
Samples: 4
Max nTPM: 65.3
Min nTPM: 0.0
RHH5305_R3671
35.0
RHH5213_R3584
65.3
RHH5241_R3613
0.0
RHH5270_R3642
38.2
Naive CD4 T-cell nTPM: 18.3
Samples: 4
Max nTPM: 48.5
Min nTPM: 0.0
RHH5306_R3672
0.0
RHH5214_R3585
48.5
RHH5242_R3614
0.0
RHH5271_R3643
24.6
Naive CD8 T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
0.0
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 762.4
Samples: 4
Max nTPM: 1551.1
Min nTPM: 340.0
RHH5235_R3607
340.0
RHH5264_R3636
1551.1
RHH5207_R3578
573.8
RHH5299_R3665
584.6
T-reg nTPM: 18.5
Samples: 4
Max nTPM: 48.1
Min nTPM: 0.0
RHH5301_R3667
13.3
RHH5237_R3609
0.0
RHH5266_R3638
12.7
RHH5209_R3580
48.1
Terminal effector memory CD4 T-cell nTPM: 214.9
Samples: 2
Max nTPM: 314.1
Min nTPM: 115.6
RHH5243_R3615
115.6
RHH5272_R3644
314.1
Terminal effector memory CD8 T-cell nTPM: 346.0
Samples: 4
Max nTPM: 525.3
Min nTPM: 124.7
RHH5232_R3604
214.2
RHH5204_R3575
124.7
RHH5261_R3633
525.3
RHH5296_R3662
519.6
Vd2 gdTCR nTPM: 666.6
Samples: 4
Max nTPM: 1112.3
Min nTPM: 354.2
RHH5234_R3606
557.5
RHH5206_R3577
354.2
RHH5263_R3635
1112.3
RHH5298_R3664
642.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
