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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.2
nTPM
Monaco:
556.2
nTPM
Schmiedel:
29.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.2
HPA sample
nTPM
gdT-cell nTPM: 59.2
Samples: 6
Max nTPM: 181.5
Min nTPM: 14.2
P10809_1007
28.6
P10809_1022
19.9
P10809_1041
73.8
P10809_1060
181.5
P10809_1077
37.1
P10809_1098
14.2
MAIT T-cell nTPM: 50.2
Samples: 6
Max nTPM: 103.1
Min nTPM: 16.6
P10809_1006
103.1
P10809_1024
39.1
P10809_1043
16.6
P10809_1062
47.7
P10809_1083
23.9
P10809_1097
70.8
Memory CD4 T-cell nTPM: 11.0
Samples: 6
Max nTPM: 21.9
Min nTPM: 3.5
P10809_1014
16.2
P10809_1026
9.6
P10809_1045
6.2
P10809_1064
21.9
P10809_1086
8.8
P10809_1113
3.5
Memory CD8 T-cell nTPM: 34.0
Samples: 5
Max nTPM: 52.2
Min nTPM: 16.3
P10809_1012
52.2
P10809_1027
33.1
P10809_1046
16.3
P10809_1065
40.2
P10809_1111
28.2
Naive CD4 T-cell nTPM: 9.4
Samples: 6
Max nTPM: 19.7
Min nTPM: 2.1
P10809_1015
19.7
P10809_1030
14.0
P10809_1049
4.5
P10809_1068
10.1
P10809_1085
6.2
P10809_1112
2.1
Naive CD8 T-cell nTPM: 27.8
Samples: 6
Max nTPM: 49.9
Min nTPM: 5.0
P10809_1016
31.6
P10809_1031
36.1
P10809_1050
5.0
P10809_1069
49.9
P10809_1087
35.9
P10809_1110
8.0
T-reg nTPM: 6.3
Samples: 6
Max nTPM: 9.2
Min nTPM: 3.4
P10809_1018
9.2
P10809_1037
3.4
P10809_1056
6.7
P10809_1075
9.1
P10809_1094
4.2
P10809_1106
5.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
556.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.0
Samples: 4
Max nTPM: 182.2
Min nTPM: 70.9
RHH5202_R3573
182.2
RHH5230_R3602
73.8
RHH5259_R3631
70.9
RHH5288_R3660
81.0
Effector memory CD8 T-cell nTPM: 257.4
Samples: 4
Max nTPM: 386.4
Min nTPM: 93.6
RHH5203_R3574
386.4
RHH5231_R3603
182.4
RHH5260_R3632
93.6
RHH5289_R3661
367.3
MAIT T-cell nTPM: 288.2
Samples: 4
Max nTPM: 334.1
Min nTPM: 222.8
RHH5233_R3605
222.8
RHH5205_R3576
334.1
RHH5262_R3634
286.5
RHH5297_R3663
309.3
Memory CD4 T-cell TFH nTPM: 45.8
Samples: 4
Max nTPM: 69.7
Min nTPM: 22.7
RHH5300_R3666
47.6
RHH5236_R3608
22.7
RHH5265_R3637
43.3
RHH5208_R3579
69.7
Memory CD4 T-cell Th1 nTPM: 65.5
Samples: 4
Max nTPM: 82.0
Min nTPM: 47.5
RHH5210_R3581
82.0
RHH5302_R3668
59.5
RHH5238_R3610
47.5
RHH5267_R3639
72.8
Memory CD4 T-cell Th1/Th17 nTPM: 81.0
Samples: 4
Max nTPM: 102.1
Min nTPM: 52.0
RHH5303_R3669
102.1
RHH5211_R3582
97.5
RHH5239_R3611
52.0
RHH5268_R3640
72.3
Memory CD4 T-cell Th17 nTPM: 76.6
Samples: 4
Max nTPM: 109.9
Min nTPM: 58.2
RHH5304_R3670
109.9
RHH5212_R3583
60.3
RHH5240_R3612
58.2
RHH5269_R3641
77.9
Memory CD4 T-cell Th2 nTPM: 57.5
Samples: 4
Max nTPM: 66.8
Min nTPM: 50.4
RHH5305_R3671
66.8
RHH5213_R3584
58.4
RHH5241_R3613
54.3
RHH5270_R3642
50.4
Naive CD4 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 104.3
Min nTPM: 61.6
RHH5306_R3672
76.5
RHH5214_R3585
61.6
RHH5242_R3614
94.9
RHH5271_R3643
104.3
Naive CD8 T-cell nTPM: 70.2
Samples: 4
Max nTPM: 94.0
Min nTPM: 30.9
RHH5201_R3572
94.0
RHH5229_R3601
30.9
RHH5258_R3630
89.1
RHH5287_R3659
66.9
Non-Vd2 gdTCR nTPM: 556.2
Samples: 4
Max nTPM: 1345.0
Min nTPM: 86.7
RHH5235_R3607
86.7
RHH5264_R3636
476.1
RHH5207_R3578
317.1
RHH5299_R3665
1345.0
T-reg nTPM: 57.3
Samples: 4
Max nTPM: 68.7
Min nTPM: 44.2
RHH5301_R3667
52.4
RHH5237_R3609
68.7
RHH5266_R3638
44.2
RHH5209_R3580
63.8
Terminal effector memory CD4 T-cell nTPM: 207.8
Samples: 2
Max nTPM: 390.9
Min nTPM: 24.7
RHH5243_R3615
24.7
RHH5272_R3644
390.9
Terminal effector memory CD8 T-cell nTPM: 408.1
Samples: 4
Max nTPM: 691.6
Min nTPM: 183.3
RHH5232_R3604
183.3
RHH5204_R3575
691.6
RHH5261_R3633
478.0
RHH5296_R3662
279.5
Vd2 gdTCR nTPM: 144.9
Samples: 4
Max nTPM: 167.1
Min nTPM: 119.0
RHH5234_R3606
119.0
RHH5206_R3577
167.1
RHH5263_R3635
141.7
RHH5298_R3664
151.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
