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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
100.5
nTPM
Monaco:
221.0
nTPM
Schmiedel:
163.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.5
HPA sample
nTPM
gdT-cell nTPM: 0.5
Samples: 6
Max nTPM: 1.2
Min nTPM: 0.0
P10809_1007
0.6
P10809_1022
1.2
P10809_1041
0.9
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 100.5
Samples: 6
Max nTPM: 246.7
Min nTPM: 53.4
P10809_1006
246.7
P10809_1024
65.9
P10809_1043
53.4
P10809_1062
81.8
P10809_1083
90.0
P10809_1097
65.1
Memory CD4 T-cell nTPM: 25.7
Samples: 6
Max nTPM: 34.0
Min nTPM: 14.7
P10809_1014
32.9
P10809_1026
26.6
P10809_1045
31.0
P10809_1064
15.1
P10809_1086
14.7
P10809_1113
34.0
Memory CD8 T-cell nTPM: 27.8
Samples: 5
Max nTPM: 56.0
Min nTPM: 14.4
P10809_1012
56.0
P10809_1027
24.4
P10809_1046
25.7
P10809_1065
14.4
P10809_1111
18.7
Naive CD4 T-cell nTPM: 23.9
Samples: 6
Max nTPM: 29.9
Min nTPM: 19.4
P10809_1015
19.4
P10809_1030
23.9
P10809_1049
29.9
P10809_1068
23.9
P10809_1085
23.6
P10809_1112
22.9
Naive CD8 T-cell nTPM: 14.5
Samples: 6
Max nTPM: 22.3
Min nTPM: 2.9
P10809_1016
22.3
P10809_1031
11.4
P10809_1050
18.5
P10809_1069
12.0
P10809_1087
2.9
P10809_1110
19.8
T-reg nTPM: 44.9
Samples: 6
Max nTPM: 51.3
Min nTPM: 34.2
P10809_1018
41.0
P10809_1037
51.3
P10809_1056
48.0
P10809_1075
46.1
P10809_1094
49.0
P10809_1106
34.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 221.0
Samples: 4
Max nTPM: 790.0
Min nTPM: 16.0
RHH5202_R3573
40.0
RHH5230_R3602
790.0
RHH5259_R3631
16.0
RHH5288_R3660
38.1
Effector memory CD8 T-cell nTPM: 216.8
Samples: 4
Max nTPM: 828.3
Min nTPM: 7.4
RHH5203_R3574
17.7
RHH5231_R3603
828.3
RHH5260_R3632
7.4
RHH5289_R3661
13.7
MAIT T-cell nTPM: 100.9
Samples: 4
Max nTPM: 169.2
Min nTPM: 53.9
RHH5233_R3605
84.0
RHH5205_R3576
53.9
RHH5262_R3634
96.3
RHH5297_R3663
169.2
Memory CD4 T-cell TFH nTPM: 80.8
Samples: 4
Max nTPM: 115.6
Min nTPM: 60.7
RHH5300_R3666
60.7
RHH5236_R3608
85.7
RHH5265_R3637
61.0
RHH5208_R3579
115.6
Memory CD4 T-cell Th1 nTPM: 28.6
Samples: 4
Max nTPM: 43.8
Min nTPM: 12.7
RHH5210_R3581
43.8
RHH5302_R3668
35.3
RHH5238_R3610
12.7
RHH5267_R3639
22.4
Memory CD4 T-cell Th1/Th17 nTPM: 40.3
Samples: 4
Max nTPM: 58.9
Min nTPM: 32.7
RHH5303_R3669
32.9
RHH5211_R3582
58.9
RHH5239_R3611
32.7
RHH5268_R3640
36.6
Memory CD4 T-cell Th17 nTPM: 35.2
Samples: 4
Max nTPM: 58.8
Min nTPM: 13.5
RHH5304_R3670
26.9
RHH5212_R3583
58.8
RHH5240_R3612
41.5
RHH5269_R3641
13.5
Memory CD4 T-cell Th2 nTPM: 43.4
Samples: 4
Max nTPM: 57.5
Min nTPM: 28.6
RHH5305_R3671
40.0
RHH5213_R3584
47.4
RHH5241_R3613
57.5
RHH5270_R3642
28.6
Naive CD4 T-cell nTPM: 33.1
Samples: 4
Max nTPM: 46.6
Min nTPM: 15.5
RHH5306_R3672
32.8
RHH5214_R3585
46.6
RHH5242_R3614
37.6
RHH5271_R3643
15.5
Naive CD8 T-cell nTPM: 30.3
Samples: 4
Max nTPM: 59.5
Min nTPM: 8.6
RHH5201_R3572
59.5
RHH5229_R3601
8.6
RHH5258_R3630
35.9
RHH5287_R3659
17.1
Non-Vd2 gdTCR nTPM: 0.3
Samples: 4
Max nTPM: 0.7
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.7
RHH5299_R3665
0.3
T-reg nTPM: 46.0
Samples: 4
Max nTPM: 61.3
Min nTPM: 24.5
RHH5301_R3667
46.9
RHH5237_R3609
61.3
RHH5266_R3638
24.5
RHH5209_R3580
51.1
Terminal effector memory CD4 T-cell nTPM: 7.2
Samples: 2
Max nTPM: 13.8
Min nTPM: 0.5
RHH5243_R3615
0.5
RHH5272_R3644
13.8
Terminal effector memory CD8 T-cell nTPM: 12.9
Samples: 4
Max nTPM: 30.5
Min nTPM: 4.6
RHH5232_R3604
30.5
RHH5204_R3575
5.4
RHH5261_R3633
4.6
RHH5296_R3662
11.0
Vd2 gdTCR nTPM: 2.5
Samples: 4
Max nTPM: 6.1
Min nTPM: 0.3
RHH5234_R3606
0.3
RHH5206_R3577
2.5
RHH5263_R3635
6.1
RHH5298_R3664
0.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
