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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3241.7
nTPM
Monaco:
3132.4
nTPM
Schmiedel:
3768.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3241.7
HPA sample
nTPM
gdT-cell nTPM: 871.9
Samples: 6
Max nTPM: 1135.1
Min nTPM: 704.1
P10809_1007
724.5
P10809_1022
998.2
P10809_1041
1135.1
P10809_1060
825.2
P10809_1077
704.1
P10809_1098
844.1
MAIT T-cell nTPM: 695.3
Samples: 6
Max nTPM: 792.3
Min nTPM: 586.7
P10809_1006
643.9
P10809_1024
781.6
P10809_1043
694.2
P10809_1062
586.7
P10809_1083
673.3
P10809_1097
792.3
Memory CD4 T-cell nTPM: 1899.2
Samples: 6
Max nTPM: 2641.5
Min nTPM: 1421.5
P10809_1014
1421.5
P10809_1026
2641.5
P10809_1045
2031.9
P10809_1064
1724.3
P10809_1086
1524.9
P10809_1113
2050.9
Memory CD8 T-cell nTPM: 1259.4
Samples: 5
Max nTPM: 1467.7
Min nTPM: 1072.0
P10809_1012
1072.0
P10809_1027
1253.0
P10809_1046
1236.2
P10809_1065
1268.1
P10809_1111
1467.7
Naive CD4 T-cell nTPM: 1996.2
Samples: 6
Max nTPM: 2636.7
Min nTPM: 1264.5
P10809_1015
1264.5
P10809_1030
2636.7
P10809_1049
2524.8
P10809_1068
1902.2
P10809_1085
1444.5
P10809_1112
2204.3
Naive CD8 T-cell nTPM: 1455.9
Samples: 6
Max nTPM: 1991.7
Min nTPM: 1021.1
P10809_1016
1052.5
P10809_1031
1991.7
P10809_1050
1021.1
P10809_1069
1926.6
P10809_1087
1251.6
P10809_1110
1491.6
T-reg nTPM: 3241.7
Samples: 6
Max nTPM: 4139.7
Min nTPM: 2237.6
P10809_1018
2237.6
P10809_1037
3444.5
P10809_1056
4139.7
P10809_1075
2624.2
P10809_1094
2931.9
P10809_1106
4072.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3132.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1450.6
Samples: 4
Max nTPM: 2139.6
Min nTPM: 760.3
RHH5202_R3573
1814.4
RHH5230_R3602
760.3
RHH5259_R3631
1087.9
RHH5288_R3660
2139.6
Effector memory CD8 T-cell nTPM: 1521.1
Samples: 4
Max nTPM: 1770.7
Min nTPM: 1059.9
RHH5203_R3574
1589.9
RHH5231_R3603
1770.7
RHH5260_R3632
1059.9
RHH5289_R3661
1663.9
MAIT T-cell nTPM: 877.5
Samples: 4
Max nTPM: 1281.7
Min nTPM: 396.0
RHH5233_R3605
1281.7
RHH5205_R3576
396.0
RHH5262_R3634
759.8
RHH5297_R3663
1072.4
Memory CD4 T-cell TFH nTPM: 3132.5
Samples: 4
Max nTPM: 3723.8
Min nTPM: 2475.7
RHH5300_R3666
3308.8
RHH5236_R3608
3723.8
RHH5265_R3637
2475.7
RHH5208_R3579
3021.5
Memory CD4 T-cell Th1 nTPM: 2143.7
Samples: 4
Max nTPM: 3245.6
Min nTPM: 1500.3
RHH5210_R3581
2208.1
RHH5302_R3668
3245.6
RHH5238_R3610
1500.3
RHH5267_R3639
1620.6
Memory CD4 T-cell Th1/Th17 nTPM: 2005.5
Samples: 4
Max nTPM: 3081.9
Min nTPM: 1127.2
RHH5303_R3669
3081.9
RHH5211_R3582
2364.7
RHH5239_R3611
1127.2
RHH5268_R3640
1448.2
Memory CD4 T-cell Th17 nTPM: 1603.4
Samples: 4
Max nTPM: 2098.2
Min nTPM: 1314.5
RHH5304_R3670
1674.3
RHH5212_R3583
2098.2
RHH5240_R3612
1326.4
RHH5269_R3641
1314.5
Memory CD4 T-cell Th2 nTPM: 2070.9
Samples: 4
Max nTPM: 2576.3
Min nTPM: 1741.2
RHH5305_R3671
2157.6
RHH5213_R3584
1808.3
RHH5241_R3613
2576.3
RHH5270_R3642
1741.2
Naive CD4 T-cell nTPM: 2443.7
Samples: 4
Max nTPM: 2898.5
Min nTPM: 1917.2
RHH5306_R3672
2898.5
RHH5214_R3585
2787.0
RHH5242_R3614
2172.0
RHH5271_R3643
1917.2
Naive CD8 T-cell nTPM: 1535.0
Samples: 4
Max nTPM: 2025.7
Min nTPM: 872.3
RHH5201_R3572
1708.9
RHH5229_R3601
872.3
RHH5258_R3630
2025.7
RHH5287_R3659
1533.1
Non-Vd2 gdTCR nTPM: 1311.0
Samples: 4
Max nTPM: 1810.2
Min nTPM: 628.1
RHH5235_R3607
628.1
RHH5264_R3636
1793.0
RHH5207_R3578
1012.8
RHH5299_R3665
1810.2
T-reg nTPM: 2554.7
Samples: 4
Max nTPM: 3252.9
Min nTPM: 1865.0
RHH5301_R3667
3252.9
RHH5237_R3609
3133.6
RHH5266_R3638
1865.0
RHH5209_R3580
1967.1
Terminal effector memory CD4 T-cell nTPM: 1177.7
Samples: 2
Max nTPM: 1221.5
Min nTPM: 1133.8
RHH5243_R3615
1221.5
RHH5272_R3644
1133.8
Terminal effector memory CD8 T-cell nTPM: 2313.2
Samples: 4
Max nTPM: 3596.7
Min nTPM: 939.4
RHH5232_R3604
1222.5
RHH5204_R3575
3494.2
RHH5261_R3633
939.4
RHH5296_R3662
3596.7
Vd2 gdTCR nTPM: 1482.5
Samples: 4
Max nTPM: 2346.9
Min nTPM: 917.5
RHH5234_R3606
1111.1
RHH5206_R3577
2346.9
RHH5263_R3635
917.5
RHH5298_R3664
1554.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.