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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1438.8
nTPM
Monaco:
322.7
nTPM
Schmiedel:
143.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1438.8
HPA sample
nTPM
gdT-cell nTPM: 1438.8
Samples: 6
Max nTPM: 2234.5
Min nTPM: 835.3
P10809_1007
835.3
P10809_1022
2234.5
P10809_1041
1242.8
P10809_1060
883.8
P10809_1077
1356.1
P10809_1098
2080.3
MAIT T-cell nTPM: 471.3
Samples: 6
Max nTPM: 786.2
Min nTPM: 185.5
P10809_1006
395.1
P10809_1024
668.0
P10809_1043
185.5
P10809_1062
288.4
P10809_1083
504.7
P10809_1097
786.2
Memory CD4 T-cell nTPM: 570.4
Samples: 6
Max nTPM: 991.3
Min nTPM: 357.6
P10809_1014
358.7
P10809_1026
991.3
P10809_1045
357.6
P10809_1064
383.1
P10809_1086
519.7
P10809_1113
811.9
Memory CD8 T-cell nTPM: 549.2
Samples: 5
Max nTPM: 791.9
Min nTPM: 323.9
P10809_1012
489.5
P10809_1027
667.6
P10809_1046
323.9
P10809_1065
473.0
P10809_1111
791.9
Naive CD4 T-cell nTPM: 517.8
Samples: 6
Max nTPM: 807.7
Min nTPM: 295.4
P10809_1015
295.4
P10809_1030
807.7
P10809_1049
360.1
P10809_1068
393.4
P10809_1085
500.6
P10809_1112
749.8
Naive CD8 T-cell nTPM: 583.7
Samples: 6
Max nTPM: 947.9
Min nTPM: 217.7
P10809_1016
319.4
P10809_1031
947.9
P10809_1050
217.7
P10809_1069
516.7
P10809_1087
739.9
P10809_1110
760.4
T-reg nTPM: 1286.1
Samples: 6
Max nTPM: 1963.7
Min nTPM: 730.7
P10809_1018
730.7
P10809_1037
1438.2
P10809_1056
1622.1
P10809_1075
784.9
P10809_1094
1177.0
P10809_1106
1963.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
322.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.1
Samples: 4
Max nTPM: 110.4
Min nTPM: 59.6
RHH5202_R3573
110.4
RHH5230_R3602
96.6
RHH5259_R3631
73.6
RHH5288_R3660
59.6
Effector memory CD8 T-cell nTPM: 109.3
Samples: 4
Max nTPM: 157.3
Min nTPM: 44.3
RHH5203_R3574
129.1
RHH5231_R3603
157.3
RHH5260_R3632
106.3
RHH5289_R3661
44.3
MAIT T-cell nTPM: 102.2
Samples: 4
Max nTPM: 174.4
Min nTPM: 67.2
RHH5233_R3605
72.6
RHH5205_R3576
174.4
RHH5262_R3634
94.7
RHH5297_R3663
67.2
Memory CD4 T-cell TFH nTPM: 144.9
Samples: 4
Max nTPM: 260.3
Min nTPM: 45.7
RHH5300_R3666
205.9
RHH5236_R3608
260.3
RHH5265_R3637
67.7
RHH5208_R3579
45.7
Memory CD4 T-cell Th1 nTPM: 96.1
Samples: 4
Max nTPM: 139.8
Min nTPM: 42.7
RHH5210_R3581
139.8
RHH5302_R3668
42.7
RHH5238_R3610
99.6
RHH5267_R3639
102.4
Memory CD4 T-cell Th1/Th17 nTPM: 96.4
Samples: 4
Max nTPM: 142.3
Min nTPM: 78.2
RHH5303_R3669
78.2
RHH5211_R3582
142.3
RHH5239_R3611
83.0
RHH5268_R3640
81.9
Memory CD4 T-cell Th17 nTPM: 97.9
Samples: 4
Max nTPM: 181.9
Min nTPM: 12.6
RHH5304_R3670
154.6
RHH5212_R3583
181.9
RHH5240_R3612
12.6
RHH5269_R3641
42.4
Memory CD4 T-cell Th2 nTPM: 124.4
Samples: 4
Max nTPM: 140.6
Min nTPM: 93.6
RHH5305_R3671
134.8
RHH5213_R3584
93.6
RHH5241_R3613
140.6
RHH5270_R3642
128.6
Naive CD4 T-cell nTPM: 157.2
Samples: 4
Max nTPM: 254.4
Min nTPM: 81.5
RHH5306_R3672
254.4
RHH5214_R3585
130.7
RHH5242_R3614
162.3
RHH5271_R3643
81.5
Naive CD8 T-cell nTPM: 93.6
Samples: 4
Max nTPM: 163.9
Min nTPM: 36.7
RHH5201_R3572
163.9
RHH5229_R3601
36.7
RHH5258_R3630
118.3
RHH5287_R3659
55.6
Non-Vd2 gdTCR nTPM: 322.8
Samples: 4
Max nTPM: 465.1
Min nTPM: 219.3
RHH5235_R3607
465.1
RHH5264_R3636
333.8
RHH5207_R3578
219.3
RHH5299_R3665
272.8
T-reg nTPM: 179.1
Samples: 4
Max nTPM: 259.3
Min nTPM: 68.9
RHH5301_R3667
68.9
RHH5237_R3609
259.3
RHH5266_R3638
239.4
RHH5209_R3580
148.6
Terminal effector memory CD4 T-cell nTPM: 25.0
Samples: 2
Max nTPM: 28.0
Min nTPM: 22.0
RHH5243_R3615
22.0
RHH5272_R3644
28.0
Terminal effector memory CD8 T-cell nTPM: 177.4
Samples: 4
Max nTPM: 248.9
Min nTPM: 123.7
RHH5232_R3604
210.2
RHH5204_R3575
248.9
RHH5261_R3633
126.8
RHH5296_R3662
123.7
Vd2 gdTCR nTPM: 249.1
Samples: 4
Max nTPM: 315.0
Min nTPM: 178.0
RHH5234_R3606
272.2
RHH5206_R3577
315.0
RHH5263_R3635
231.3
RHH5298_R3664
178.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
