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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1105.0
nTPM
Monaco:
243.5
nTPM
Schmiedel:
29.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1105.0
HPA sample
nTPM
gdT-cell nTPM: 104.0
Samples: 6
Max nTPM: 136.5
Min nTPM: 75.6
P10809_1007
75.6
P10809_1022
113.6
P10809_1041
136.5
P10809_1060
122.5
P10809_1077
79.4
P10809_1098
96.1
MAIT T-cell nTPM: 272.4
Samples: 6
Max nTPM: 499.6
Min nTPM: 176.4
P10809_1006
176.4
P10809_1024
210.5
P10809_1043
304.1
P10809_1062
186.1
P10809_1083
499.6
P10809_1097
257.8
Memory CD4 T-cell nTPM: 587.3
Samples: 6
Max nTPM: 723.8
Min nTPM: 468.3
P10809_1014
637.4
P10809_1026
723.8
P10809_1045
594.1
P10809_1064
468.3
P10809_1086
512.0
P10809_1113
588.4
Memory CD8 T-cell nTPM: 390.5
Samples: 5
Max nTPM: 635.6
Min nTPM: 233.7
P10809_1012
479.0
P10809_1027
279.7
P10809_1046
635.6
P10809_1065
233.7
P10809_1111
324.3
Naive CD4 T-cell nTPM: 665.8
Samples: 6
Max nTPM: 981.8
Min nTPM: 516.3
P10809_1015
516.3
P10809_1030
563.1
P10809_1049
711.4
P10809_1068
593.6
P10809_1085
981.8
P10809_1112
628.7
Naive CD8 T-cell nTPM: 356.2
Samples: 6
Max nTPM: 450.7
Min nTPM: 230.9
P10809_1016
382.3
P10809_1031
450.7
P10809_1050
357.9
P10809_1069
316.8
P10809_1087
230.9
P10809_1110
398.7
T-reg nTPM: 1105.0
Samples: 6
Max nTPM: 1643.0
Min nTPM: 850.6
P10809_1018
888.0
P10809_1037
1013.8
P10809_1056
1643.0
P10809_1075
850.6
P10809_1094
1131.8
P10809_1106
1102.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.7
Samples: 4
Max nTPM: 141.3
Min nTPM: 98.3
RHH5202_R3573
141.3
RHH5230_R3602
98.3
RHH5259_R3631
107.6
RHH5288_R3660
107.7
Effector memory CD8 T-cell nTPM: 111.5
Samples: 4
Max nTPM: 154.9
Min nTPM: 70.2
RHH5203_R3574
148.7
RHH5231_R3603
72.3
RHH5260_R3632
154.9
RHH5289_R3661
70.2
MAIT T-cell nTPM: 108.9
Samples: 4
Max nTPM: 177.1
Min nTPM: 47.0
RHH5233_R3605
115.7
RHH5205_R3576
47.0
RHH5262_R3634
177.1
RHH5297_R3663
95.7
Memory CD4 T-cell TFH nTPM: 174.2
Samples: 4
Max nTPM: 257.1
Min nTPM: 81.9
RHH5300_R3666
202.6
RHH5236_R3608
257.1
RHH5265_R3637
155.1
RHH5208_R3579
81.9
Memory CD4 T-cell Th1 nTPM: 205.1
Samples: 4
Max nTPM: 243.5
Min nTPM: 152.6
RHH5210_R3581
243.5
RHH5302_R3668
152.6
RHH5238_R3610
207.8
RHH5267_R3639
216.6
Memory CD4 T-cell Th1/Th17 nTPM: 243.5
Samples: 4
Max nTPM: 340.7
Min nTPM: 176.4
RHH5303_R3669
266.0
RHH5211_R3582
340.7
RHH5239_R3611
190.9
RHH5268_R3640
176.4
Memory CD4 T-cell Th17 nTPM: 114.4
Samples: 4
Max nTPM: 181.8
Min nTPM: 46.5
RHH5304_R3670
141.3
RHH5212_R3583
181.8
RHH5240_R3612
46.5
RHH5269_R3641
88.0
Memory CD4 T-cell Th2 nTPM: 202.7
Samples: 4
Max nTPM: 335.4
Min nTPM: 135.8
RHH5305_R3671
335.4
RHH5213_R3584
172.2
RHH5241_R3613
167.4
RHH5270_R3642
135.8
Naive CD4 T-cell nTPM: 208.5
Samples: 4
Max nTPM: 323.0
Min nTPM: 93.3
RHH5306_R3672
323.0
RHH5214_R3585
169.8
RHH5242_R3614
247.8
RHH5271_R3643
93.3
Naive CD8 T-cell nTPM: 151.1
Samples: 4
Max nTPM: 174.4
Min nTPM: 131.4
RHH5201_R3572
131.4
RHH5229_R3601
132.8
RHH5258_R3630
174.4
RHH5287_R3659
165.6
Non-Vd2 gdTCR nTPM: 105.0
Samples: 4
Max nTPM: 173.7
Min nTPM: 51.2
RHH5235_R3607
173.7
RHH5264_R3636
83.6
RHH5207_R3578
51.2
RHH5299_R3665
111.4
T-reg nTPM: 160.5
Samples: 4
Max nTPM: 210.6
Min nTPM: 103.9
RHH5301_R3667
103.9
RHH5237_R3609
210.6
RHH5266_R3638
119.3
RHH5209_R3580
208.3
Terminal effector memory CD4 T-cell nTPM: 132.7
Samples: 2
Max nTPM: 135.8
Min nTPM: 129.6
RHH5243_R3615
135.8
RHH5272_R3644
129.6
Terminal effector memory CD8 T-cell nTPM: 221.6
Samples: 4
Max nTPM: 364.5
Min nTPM: 84.5
RHH5232_R3604
324.3
RHH5204_R3575
84.5
RHH5261_R3633
364.5
RHH5296_R3662
113.1
Vd2 gdTCR nTPM: 96.7
Samples: 4
Max nTPM: 102.4
Min nTPM: 92.7
RHH5234_R3606
102.4
RHH5206_R3577
93.2
RHH5263_R3635
92.7
RHH5298_R3664
98.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
