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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4232.8
nTPM
Monaco:
685.6
nTPM
Schmiedel:
176.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4232.8
HPA sample
nTPM
gdT-cell nTPM: 360.9
Samples: 6
Max nTPM: 538.3
Min nTPM: 249.4
P10809_1007
398.2
P10809_1022
538.3
P10809_1041
373.6
P10809_1060
349.0
P10809_1077
249.4
P10809_1098
257.0
MAIT T-cell nTPM: 1278.7
Samples: 6
Max nTPM: 1948.3
Min nTPM: 699.4
P10809_1006
1948.3
P10809_1024
699.4
P10809_1043
1707.1
P10809_1062
1209.6
P10809_1083
1347.5
P10809_1097
760.3
Memory CD4 T-cell nTPM: 2394.0
Samples: 6
Max nTPM: 3236.9
Min nTPM: 1872.3
P10809_1014
2247.3
P10809_1026
2109.5
P10809_1045
1994.7
P10809_1064
3236.9
P10809_1086
2903.1
P10809_1113
1872.3
Memory CD8 T-cell nTPM: 2654.4
Samples: 5
Max nTPM: 4079.6
Min nTPM: 1792.5
P10809_1012
3048.3
P10809_1027
2427.2
P10809_1046
1924.5
P10809_1065
4079.6
P10809_1111
1792.5
Naive CD4 T-cell nTPM: 2400.3
Samples: 6
Max nTPM: 2927.6
Min nTPM: 1973.9
P10809_1015
1973.9
P10809_1030
2077.1
P10809_1049
2927.6
P10809_1068
2892.4
P10809_1085
2478.0
P10809_1112
2053.0
Naive CD8 T-cell nTPM: 2837.5
Samples: 6
Max nTPM: 3542.8
Min nTPM: 2145.0
P10809_1016
2794.3
P10809_1031
2597.8
P10809_1050
2428.9
P10809_1069
3542.8
P10809_1087
3516.3
P10809_1110
2145.0
T-reg nTPM: 4232.8
Samples: 6
Max nTPM: 6709.7
Min nTPM: 3048.1
P10809_1018
3641.8
P10809_1037
3048.1
P10809_1056
6709.7
P10809_1075
3984.8
P10809_1094
4668.9
P10809_1106
3343.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
685.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 592.4
Samples: 4
Max nTPM: 846.8
Min nTPM: 0.0
RHH5202_R3573
846.8
RHH5230_R3602
733.5
RHH5259_R3631
0.0
RHH5288_R3660
789.3
Effector memory CD8 T-cell nTPM: 587.8
Samples: 4
Max nTPM: 1207.4
Min nTPM: 0.0
RHH5203_R3574
429.8
RHH5231_R3603
713.8
RHH5260_R3632
0.0
RHH5289_R3661
1207.4
MAIT T-cell nTPM: 448.0
Samples: 4
Max nTPM: 708.8
Min nTPM: 0.0
RHH5233_R3605
708.8
RHH5205_R3576
549.6
RHH5262_R3634
0.0
RHH5297_R3663
533.6
Memory CD4 T-cell TFH nTPM: 611.5
Samples: 4
Max nTPM: 1229.0
Min nTPM: 0.0
RHH5300_R3666
570.8
RHH5236_R3608
1229.0
RHH5265_R3637
0.0
RHH5208_R3579
646.2
Memory CD4 T-cell Th1 nTPM: 579.9
Samples: 4
Max nTPM: 855.4
Min nTPM: 0.0
RHH5210_R3581
846.7
RHH5302_R3668
855.4
RHH5238_R3610
617.4
RHH5267_R3639
0.0
Memory CD4 T-cell Th1/Th17 nTPM: 572.7
Samples: 4
Max nTPM: 1164.0
Min nTPM: 19.6
RHH5303_R3669
749.4
RHH5211_R3582
1164.0
RHH5239_R3611
357.9
RHH5268_R3640
19.6
Memory CD4 T-cell Th17 nTPM: 538.4
Samples: 4
Max nTPM: 983.2
Min nTPM: 0.0
RHH5304_R3670
683.1
RHH5212_R3583
983.2
RHH5240_R3612
487.2
RHH5269_R3641
0.0
Memory CD4 T-cell Th2 nTPM: 638.3
Samples: 4
Max nTPM: 882.2
Min nTPM: 0.0
RHH5305_R3671
832.8
RHH5213_R3584
838.0
RHH5241_R3613
882.2
RHH5270_R3642
0.0
Naive CD4 T-cell nTPM: 685.6
Samples: 4
Max nTPM: 998.7
Min nTPM: 0.0
RHH5306_R3672
998.7
RHH5214_R3585
912.2
RHH5242_R3614
831.6
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 490.6
Samples: 4
Max nTPM: 880.3
Min nTPM: 0.0
RHH5201_R3572
880.3
RHH5229_R3601
341.2
RHH5258_R3630
0.0
RHH5287_R3659
740.7
Non-Vd2 gdTCR nTPM: 325.4
Samples: 4
Max nTPM: 518.3
Min nTPM: 0.0
RHH5235_R3607
365.8
RHH5264_R3636
0.0
RHH5207_R3578
518.3
RHH5299_R3665
417.4
T-reg nTPM: 681.2
Samples: 4
Max nTPM: 1193.6
Min nTPM: 0.0
RHH5301_R3667
1193.6
RHH5237_R3609
1073.7
RHH5266_R3638
0.0
RHH5209_R3580
457.6
Terminal effector memory CD4 T-cell nTPM: 123.8
Samples: 2
Max nTPM: 247.5
Min nTPM: 0.0
RHH5243_R3615
247.5
RHH5272_R3644
0.0
Terminal effector memory CD8 T-cell nTPM: 609.4
Samples: 4
Max nTPM: 1128.8
Min nTPM: 0.0
RHH5232_R3604
1128.8
RHH5204_R3575
577.9
RHH5261_R3633
0.0
RHH5296_R3662
730.9
Vd2 gdTCR nTPM: 240.2
Samples: 4
Max nTPM: 464.7
Min nTPM: 0.0
RHH5234_R3606
379.9
RHH5206_R3577
116.3
RHH5263_R3635
0.0
RHH5298_R3664
464.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
