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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.2
nTPM
Monaco:
156.4
nTPM
Schmiedel:
5444.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.2
HPA sample
nTPM
gdT-cell nTPM: 14.5
Samples: 6
Max nTPM: 28.2
Min nTPM: 0.0
P10809_1007
0.0
P10809_1022
14.5
P10809_1041
13.2
P10809_1060
20.4
P10809_1077
28.2
P10809_1098
10.6
MAIT T-cell nTPM: 35.1
Samples: 6
Max nTPM: 66.1
Min nTPM: 0.5
P10809_1006
0.5
P10809_1024
16.0
P10809_1043
44.0
P10809_1062
32.2
P10809_1083
66.1
P10809_1097
51.9
Memory CD4 T-cell nTPM: 47.7
Samples: 6
Max nTPM: 87.5
Min nTPM: 1.8
P10809_1014
1.8
P10809_1026
31.7
P10809_1045
87.5
P10809_1064
53.7
P10809_1086
72.0
P10809_1113
39.6
Memory CD8 T-cell nTPM: 47.3
Samples: 5
Max nTPM: 84.4
Min nTPM: 0.2
P10809_1012
0.2
P10809_1027
65.0
P10809_1046
84.4
P10809_1065
52.8
P10809_1111
34.3
Naive CD4 T-cell nTPM: 46.8
Samples: 6
Max nTPM: 82.6
Min nTPM: 0.4
P10809_1015
0.4
P10809_1030
35.0
P10809_1049
79.9
P10809_1068
55.0
P10809_1085
82.6
P10809_1112
27.9
Naive CD8 T-cell nTPM: 40.4
Samples: 6
Max nTPM: 64.6
Min nTPM: 1.3
P10809_1016
1.3
P10809_1031
45.7
P10809_1050
64.6
P10809_1069
40.3
P10809_1087
62.7
P10809_1110
27.8
T-reg nTPM: 76.2
Samples: 6
Max nTPM: 126.3
Min nTPM: 1.1
P10809_1018
1.1
P10809_1037
88.3
P10809_1056
73.8
P10809_1075
112.2
P10809_1094
126.3
P10809_1106
55.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 97.9
Samples: 4
Max nTPM: 117.7
Min nTPM: 72.6
RHH5202_R3573
104.6
RHH5230_R3602
96.8
RHH5259_R3631
72.6
RHH5288_R3660
117.7
Effector memory CD8 T-cell nTPM: 122.2
Samples: 4
Max nTPM: 143.1
Min nTPM: 75.5
RHH5203_R3574
75.5
RHH5231_R3603
143.1
RHH5260_R3632
129.3
RHH5289_R3661
140.9
MAIT T-cell nTPM: 77.5
Samples: 4
Max nTPM: 118.6
Min nTPM: 18.9
RHH5233_R3605
118.6
RHH5205_R3576
18.9
RHH5262_R3634
79.0
RHH5297_R3663
93.3
Memory CD4 T-cell TFH nTPM: 111.3
Samples: 4
Max nTPM: 149.8
Min nTPM: 90.2
RHH5300_R3666
108.0
RHH5236_R3608
149.8
RHH5265_R3637
97.1
RHH5208_R3579
90.2
Memory CD4 T-cell Th1 nTPM: 66.7
Samples: 4
Max nTPM: 87.0
Min nTPM: 48.0
RHH5210_R3581
48.0
RHH5302_R3668
87.0
RHH5238_R3610
58.0
RHH5267_R3639
73.6
Memory CD4 T-cell Th1/Th17 nTPM: 59.4
Samples: 4
Max nTPM: 146.9
Min nTPM: 10.2
RHH5303_R3669
146.9
RHH5211_R3582
10.2
RHH5239_R3611
17.4
RHH5268_R3640
63.2
Memory CD4 T-cell Th17 nTPM: 80.1
Samples: 4
Max nTPM: 99.5
Min nTPM: 57.8
RHH5304_R3670
77.7
RHH5212_R3583
57.8
RHH5240_R3612
99.5
RHH5269_R3641
85.2
Memory CD4 T-cell Th2 nTPM: 106.9
Samples: 4
Max nTPM: 115.6
Min nTPM: 86.7
RHH5305_R3671
111.1
RHH5213_R3584
86.7
RHH5241_R3613
114.1
RHH5270_R3642
115.6
Naive CD4 T-cell nTPM: 103.8
Samples: 4
Max nTPM: 182.5
Min nTPM: 51.4
RHH5306_R3672
182.5
RHH5214_R3585
51.4
RHH5242_R3614
91.8
RHH5271_R3643
89.3
Naive CD8 T-cell nTPM: 64.8
Samples: 4
Max nTPM: 82.4
Min nTPM: 52.8
RHH5201_R3572
70.0
RHH5229_R3601
54.1
RHH5258_R3630
52.8
RHH5287_R3659
82.4
Non-Vd2 gdTCR nTPM: 47.0
Samples: 4
Max nTPM: 75.0
Min nTPM: 32.5
RHH5235_R3607
39.1
RHH5264_R3636
32.5
RHH5207_R3578
41.5
RHH5299_R3665
75.0
T-reg nTPM: 102.2
Samples: 4
Max nTPM: 139.2
Min nTPM: 54.3
RHH5301_R3667
139.2
RHH5237_R3609
132.1
RHH5266_R3638
83.2
RHH5209_R3580
54.3
Terminal effector memory CD4 T-cell nTPM: 99.6
Samples: 2
Max nTPM: 199.2
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
199.2
Terminal effector memory CD8 T-cell nTPM: 156.5
Samples: 4
Max nTPM: 220.5
Min nTPM: 49.7
RHH5232_R3604
220.5
RHH5204_R3575
49.7
RHH5261_R3633
148.7
RHH5296_R3662
206.9
Vd2 gdTCR nTPM: 21.0
Samples: 4
Max nTPM: 40.6
Min nTPM: 5.8
RHH5234_R3606
40.6
RHH5206_R3577
6.5
RHH5263_R3635
5.8
RHH5298_R3664
31.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
