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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.0
nTPM
Monaco:
256.7
nTPM
Schmiedel:
235.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.0
HPA sample
nTPM
gdT-cell nTPM: 0.1
Samples: 6
Max nTPM: 0.5
Min nTPM: 0.0
P10809_1007
0.5
P10809_1022
0.2
P10809_1041
0.0
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 31.3
Samples: 6
Max nTPM: 61.5
Min nTPM: 15.9
P10809_1006
30.5
P10809_1024
61.5
P10809_1043
15.9
P10809_1062
17.6
P10809_1083
35.1
P10809_1097
27.4
Memory CD4 T-cell nTPM: 31.6
Samples: 6
Max nTPM: 46.9
Min nTPM: 9.6
P10809_1014
37.7
P10809_1026
39.6
P10809_1045
46.9
P10809_1064
9.6
P10809_1086
27.5
P10809_1113
28.4
Memory CD8 T-cell nTPM: 9.9
Samples: 5
Max nTPM: 19.3
Min nTPM: 4.0
P10809_1012
8.7
P10809_1027
8.6
P10809_1046
19.3
P10809_1065
4.0
P10809_1111
8.9
Naive CD4 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 34.9
Min nTPM: 17.6
P10809_1015
34.9
P10809_1030
21.6
P10809_1049
28.9
P10809_1068
22.6
P10809_1085
22.2
P10809_1112
17.6
Naive CD8 T-cell nTPM: 9.6
Samples: 6
Max nTPM: 18.8
Min nTPM: 1.8
P10809_1016
18.8
P10809_1031
10.9
P10809_1050
13.0
P10809_1069
6.7
P10809_1087
1.8
P10809_1110
6.5
T-reg nTPM: 41.0
Samples: 6
Max nTPM: 80.4
Min nTPM: 18.4
P10809_1018
46.7
P10809_1037
80.4
P10809_1056
40.9
P10809_1075
34.4
P10809_1094
18.4
P10809_1106
25.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
256.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 133.1
Min nTPM: 18.5
RHH5202_R3573
133.1
RHH5230_R3602
18.5
RHH5259_R3631
39.5
RHH5288_R3660
94.1
Effector memory CD8 T-cell nTPM: 137.7
Samples: 4
Max nTPM: 445.2
Min nTPM: 18.3
RHH5203_R3574
445.2
RHH5231_R3603
33.5
RHH5260_R3632
53.8
RHH5289_R3661
18.3
MAIT T-cell nTPM: 256.7
Samples: 4
Max nTPM: 535.8
Min nTPM: 116.9
RHH5233_R3605
211.1
RHH5205_R3576
116.9
RHH5262_R3634
535.8
RHH5297_R3663
163.0
Memory CD4 T-cell TFH nTPM: 202.1
Samples: 4
Max nTPM: 221.3
Min nTPM: 170.0
RHH5300_R3666
221.3
RHH5236_R3608
170.0
RHH5265_R3637
219.4
RHH5208_R3579
197.7
Memory CD4 T-cell Th1 nTPM: 170.0
Samples: 4
Max nTPM: 203.6
Min nTPM: 112.7
RHH5210_R3581
193.9
RHH5302_R3668
203.6
RHH5238_R3610
112.7
RHH5267_R3639
169.6
Memory CD4 T-cell Th1/Th17 nTPM: 164.1
Samples: 4
Max nTPM: 221.5
Min nTPM: 119.1
RHH5303_R3669
221.5
RHH5211_R3582
194.5
RHH5239_R3611
119.1
RHH5268_R3640
121.1
Memory CD4 T-cell Th17 nTPM: 153.4
Samples: 4
Max nTPM: 220.5
Min nTPM: 99.1
RHH5304_R3670
131.8
RHH5212_R3583
220.5
RHH5240_R3612
99.1
RHH5269_R3641
162.2
Memory CD4 T-cell Th2 nTPM: 144.7
Samples: 4
Max nTPM: 217.8
Min nTPM: 103.4
RHH5305_R3671
130.1
RHH5213_R3584
103.4
RHH5241_R3613
217.8
RHH5270_R3642
127.5
Naive CD4 T-cell nTPM: 153.2
Samples: 4
Max nTPM: 191.1
Min nTPM: 91.8
RHH5306_R3672
191.1
RHH5214_R3585
154.0
RHH5242_R3614
175.8
RHH5271_R3643
91.8
Naive CD8 T-cell nTPM: 101.1
Samples: 4
Max nTPM: 118.0
Min nTPM: 81.6
RHH5201_R3572
118.0
RHH5229_R3601
89.3
RHH5258_R3630
115.4
RHH5287_R3659
81.6
Non-Vd2 gdTCR nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 185.6
Samples: 4
Max nTPM: 212.9
Min nTPM: 148.5
RHH5301_R3667
212.9
RHH5237_R3609
209.8
RHH5266_R3638
171.0
RHH5209_R3580
148.5
Terminal effector memory CD4 T-cell nTPM: 51.8
Samples: 2
Max nTPM: 99.6
Min nTPM: 4.0
RHH5243_R3615
4.0
RHH5272_R3644
99.6
Terminal effector memory CD8 T-cell nTPM: 172.1
Samples: 4
Max nTPM: 433.5
Min nTPM: 20.2
RHH5232_R3604
433.5
RHH5204_R3575
200.9
RHH5261_R3633
33.9
RHH5296_R3662
20.2
Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 12.4
Min nTPM: 1.1
RHH5234_R3606
1.1
RHH5206_R3577
12.4
RHH5263_R3635
9.7
RHH5298_R3664
11.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
