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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
113.1
nTPM
Monaco:
238.9
nTPM
Schmiedel:
110.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
113.1
HPA sample
nTPM
gdT-cell nTPM: 0.5
Samples: 6
Max nTPM: 2.4
Min nTPM: 0.0
P10809_1007
0.0
P10809_1022
2.4
P10809_1041
0.1
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.2
MAIT T-cell nTPM: 14.3
Samples: 6
Max nTPM: 26.6
Min nTPM: 6.1
P10809_1006
7.9
P10809_1024
26.6
P10809_1043
6.1
P10809_1062
7.8
P10809_1083
20.2
P10809_1097
17.1
Memory CD4 T-cell nTPM: 49.0
Samples: 6
Max nTPM: 72.3
Min nTPM: 31.2
P10809_1014
52.1
P10809_1026
72.3
P10809_1045
56.4
P10809_1064
36.0
P10809_1086
31.2
P10809_1113
45.7
Memory CD8 T-cell nTPM: 33.6
Samples: 5
Max nTPM: 64.5
Min nTPM: 14.5
P10809_1012
39.5
P10809_1027
19.0
P10809_1046
30.3
P10809_1065
14.5
P10809_1111
64.5
Naive CD4 T-cell nTPM: 51.4
Samples: 6
Max nTPM: 62.3
Min nTPM: 45.1
P10809_1015
45.1
P10809_1030
62.3
P10809_1049
54.8
P10809_1068
51.3
P10809_1085
46.4
P10809_1112
48.2
Naive CD8 T-cell nTPM: 48.0
Samples: 6
Max nTPM: 67.4
Min nTPM: 22.9
P10809_1016
55.1
P10809_1031
61.7
P10809_1050
67.4
P10809_1069
22.9
P10809_1087
30.3
P10809_1110
50.6
T-reg nTPM: 113.1
Samples: 6
Max nTPM: 194.5
Min nTPM: 78.5
P10809_1018
78.5
P10809_1037
194.5
P10809_1056
78.9
P10809_1075
103.4
P10809_1094
124.1
P10809_1106
99.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 99.2
Samples: 4
Max nTPM: 173.8
Min nTPM: 67.3
RHH5202_R3573
173.8
RHH5230_R3602
67.3
RHH5259_R3631
69.9
RHH5288_R3660
85.6
Effector memory CD8 T-cell nTPM: 81.8
Samples: 4
Max nTPM: 128.1
Min nTPM: 59.2
RHH5203_R3574
59.2
RHH5231_R3603
66.5
RHH5260_R3632
128.1
RHH5289_R3661
73.5
MAIT T-cell nTPM: 24.0
Samples: 4
Max nTPM: 26.5
Min nTPM: 21.6
RHH5233_R3605
24.4
RHH5205_R3576
23.4
RHH5262_R3634
26.5
RHH5297_R3663
21.6
Memory CD4 T-cell TFH nTPM: 96.6
Samples: 4
Max nTPM: 120.2
Min nTPM: 73.3
RHH5300_R3666
91.6
RHH5236_R3608
73.3
RHH5265_R3637
101.2
RHH5208_R3579
120.2
Memory CD4 T-cell Th1 nTPM: 86.0
Samples: 4
Max nTPM: 97.9
Min nTPM: 63.8
RHH5210_R3581
97.5
RHH5302_R3668
97.9
RHH5238_R3610
63.8
RHH5267_R3639
84.6
Memory CD4 T-cell Th1/Th17 nTPM: 93.6
Samples: 4
Max nTPM: 121.8
Min nTPM: 57.5
RHH5303_R3669
121.8
RHH5211_R3582
120.4
RHH5239_R3611
57.5
RHH5268_R3640
74.8
Memory CD4 T-cell Th17 nTPM: 94.9
Samples: 4
Max nTPM: 107.0
Min nTPM: 76.2
RHH5304_R3670
76.2
RHH5212_R3583
107.0
RHH5240_R3612
101.7
RHH5269_R3641
94.8
Memory CD4 T-cell Th2 nTPM: 83.9
Samples: 4
Max nTPM: 89.2
Min nTPM: 76.5
RHH5305_R3671
76.5
RHH5213_R3584
88.8
RHH5241_R3613
89.2
RHH5270_R3642
81.0
Naive CD4 T-cell nTPM: 75.7
Samples: 4
Max nTPM: 94.0
Min nTPM: 55.0
RHH5306_R3672
55.0
RHH5214_R3585
94.0
RHH5242_R3614
77.5
RHH5271_R3643
76.2
Naive CD8 T-cell nTPM: 88.0
Samples: 4
Max nTPM: 110.8
Min nTPM: 45.5
RHH5201_R3572
105.2
RHH5229_R3601
45.5
RHH5258_R3630
110.8
RHH5287_R3659
90.3
Non-Vd2 gdTCR nTPM: 0.4
Samples: 4
Max nTPM: 1.5
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
1.5
RHH5299_R3665
0.0
T-reg nTPM: 104.9
Samples: 4
Max nTPM: 127.9
Min nTPM: 83.4
RHH5301_R3667
83.4
RHH5237_R3609
102.8
RHH5266_R3638
127.9
RHH5209_R3580
105.3
Terminal effector memory CD4 T-cell nTPM: 13.5
Samples: 2
Max nTPM: 22.7
Min nTPM: 4.2
RHH5243_R3615
4.2
RHH5272_R3644
22.7
Terminal effector memory CD8 T-cell nTPM: 238.9
Samples: 4
Max nTPM: 883.6
Min nTPM: 11.4
RHH5232_R3604
11.4
RHH5204_R3575
883.6
RHH5261_R3633
35.3
RHH5296_R3662
25.4
Vd2 gdTCR nTPM: 6.0
Samples: 4
Max nTPM: 11.2
Min nTPM: 1.8
RHH5234_R3606
3.6
RHH5206_R3577
1.8
RHH5263_R3635
11.2
RHH5298_R3664
7.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
