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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
168.5
nTPM
Monaco:
289.6
nTPM
Schmiedel:
178.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
168.5
HPA sample
nTPM
gdT-cell nTPM: 0.6
Samples: 6
Max nTPM: 2.3
Min nTPM: 0.1
P10809_1007
0.1
P10809_1022
0.4
P10809_1041
2.3
P10809_1060
0.2
P10809_1077
0.6
P10809_1098
0.1
MAIT T-cell nTPM: 66.3
Samples: 6
Max nTPM: 105.7
Min nTPM: 34.8
P10809_1006
54.4
P10809_1024
67.5
P10809_1043
34.8
P10809_1062
51.8
P10809_1083
83.4
P10809_1097
105.7
Memory CD4 T-cell nTPM: 82.2
Samples: 6
Max nTPM: 108.2
Min nTPM: 64.2
P10809_1014
108.2
P10809_1026
74.5
P10809_1045
71.7
P10809_1064
64.2
P10809_1086
90.2
P10809_1113
84.5
Memory CD8 T-cell nTPM: 124.1
Samples: 5
Max nTPM: 252.8
Min nTPM: 32.8
P10809_1012
101.1
P10809_1027
252.8
P10809_1046
34.8
P10809_1065
32.8
P10809_1111
199.0
Naive CD4 T-cell nTPM: 77.4
Samples: 6
Max nTPM: 97.6
Min nTPM: 67.5
P10809_1015
97.6
P10809_1030
67.5
P10809_1049
68.0
P10809_1068
71.2
P10809_1085
92.6
P10809_1112
67.5
Naive CD8 T-cell nTPM: 81.3
Samples: 6
Max nTPM: 137.3
Min nTPM: 17.8
P10809_1016
101.5
P10809_1031
137.3
P10809_1050
59.7
P10809_1069
72.2
P10809_1087
17.8
P10809_1110
99.4
T-reg nTPM: 168.5
Samples: 6
Max nTPM: 190.7
Min nTPM: 150.0
P10809_1018
177.3
P10809_1037
170.3
P10809_1056
150.0
P10809_1075
190.7
P10809_1094
171.8
P10809_1106
150.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
289.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 128.4
Samples: 4
Max nTPM: 206.1
Min nTPM: 50.9
RHH5202_R3573
206.1
RHH5230_R3602
50.9
RHH5259_R3631
105.1
RHH5288_R3660
151.4
Effector memory CD8 T-cell nTPM: 69.4
Samples: 4
Max nTPM: 90.2
Min nTPM: 52.4
RHH5203_R3574
90.2
RHH5231_R3603
75.7
RHH5260_R3632
52.4
RHH5289_R3661
59.1
MAIT T-cell nTPM: 71.6
Samples: 4
Max nTPM: 101.1
Min nTPM: 40.6
RHH5233_R3605
101.1
RHH5205_R3576
64.0
RHH5262_R3634
40.6
RHH5297_R3663
80.8
Memory CD4 T-cell TFH nTPM: 147.1
Samples: 4
Max nTPM: 235.1
Min nTPM: 102.4
RHH5300_R3666
102.4
RHH5236_R3608
235.1
RHH5265_R3637
133.6
RHH5208_R3579
117.2
Memory CD4 T-cell Th1 nTPM: 83.7
Samples: 4
Max nTPM: 84.6
Min nTPM: 82.4
RHH5210_R3581
82.4
RHH5302_R3668
84.6
RHH5238_R3610
84.2
RHH5267_R3639
83.5
Memory CD4 T-cell Th1/Th17 nTPM: 101.5
Samples: 4
Max nTPM: 125.6
Min nTPM: 75.7
RHH5303_R3669
125.6
RHH5211_R3582
115.0
RHH5239_R3611
89.5
RHH5268_R3640
75.7
Memory CD4 T-cell Th17 nTPM: 117.1
Samples: 4
Max nTPM: 181.5
Min nTPM: 76.9
RHH5304_R3670
109.8
RHH5212_R3583
76.9
RHH5240_R3612
181.5
RHH5269_R3641
100.2
Memory CD4 T-cell Th2 nTPM: 119.4
Samples: 4
Max nTPM: 138.3
Min nTPM: 102.4
RHH5305_R3671
107.1
RHH5213_R3584
102.4
RHH5241_R3613
138.3
RHH5270_R3642
129.7
Naive CD4 T-cell nTPM: 106.7
Samples: 4
Max nTPM: 140.8
Min nTPM: 85.4
RHH5306_R3672
87.2
RHH5214_R3585
140.8
RHH5242_R3614
113.5
RHH5271_R3643
85.4
Naive CD8 T-cell nTPM: 152.7
Samples: 4
Max nTPM: 223.0
Min nTPM: 91.7
RHH5201_R3572
172.3
RHH5229_R3601
123.6
RHH5258_R3630
223.0
RHH5287_R3659
91.7
Non-Vd2 gdTCR nTPM: 0.6
Samples: 4
Max nTPM: 1.3
Min nTPM: 0.0
RHH5235_R3607
1.3
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
1.2
T-reg nTPM: 154.6
Samples: 4
Max nTPM: 233.9
Min nTPM: 109.5
RHH5301_R3667
127.6
RHH5237_R3609
233.9
RHH5266_R3638
109.5
RHH5209_R3580
147.3
Terminal effector memory CD4 T-cell nTPM: 14.4
Samples: 2
Max nTPM: 20.2
Min nTPM: 8.6
RHH5243_R3615
8.6
RHH5272_R3644
20.2
Terminal effector memory CD8 T-cell nTPM: 289.6
Samples: 4
Max nTPM: 1036.0
Min nTPM: 31.1
RHH5232_R3604
1036.0
RHH5204_R3575
47.1
RHH5261_R3633
31.1
RHH5296_R3662
44.1
Vd2 gdTCR nTPM: 9.3
Samples: 4
Max nTPM: 13.1
Min nTPM: 0.0
RHH5234_R3606
13.0
RHH5206_R3577
0.0
RHH5263_R3635
13.1
RHH5298_R3664
11.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
