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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.7
nTPM
Monaco:
643.6
nTPM
Schmiedel:
62.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.7
HPA sample
nTPM
gdT-cell nTPM: 1.1
Samples: 6
Max nTPM: 3.8
Min nTPM: 0.0
P10809_1007
0.1
P10809_1022
1.9
P10809_1041
3.8
P10809_1060
0.0
P10809_1077
0.5
P10809_1098
0.0
MAIT T-cell nTPM: 24.7
Samples: 6
Max nTPM: 43.3
Min nTPM: 17.6
P10809_1006
18.6
P10809_1024
43.3
P10809_1043
17.6
P10809_1062
22.7
P10809_1083
18.0
P10809_1097
28.0
Memory CD4 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 62.5
Min nTPM: 27.6
P10809_1014
44.8
P10809_1026
62.5
P10809_1045
54.0
P10809_1064
27.6
P10809_1086
61.5
P10809_1113
47.9
Memory CD8 T-cell nTPM: 77.4
Samples: 5
Max nTPM: 132.6
Min nTPM: 34.5
P10809_1012
40.5
P10809_1027
132.6
P10809_1046
89.9
P10809_1065
34.5
P10809_1111
89.6
Naive CD4 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 56.0
Min nTPM: 28.7
P10809_1015
30.8
P10809_1030
38.3
P10809_1049
52.2
P10809_1068
34.7
P10809_1085
56.0
P10809_1112
28.7
Naive CD8 T-cell nTPM: 74.3
Samples: 6
Max nTPM: 139.5
Min nTPM: 24.0
P10809_1016
49.4
P10809_1031
65.9
P10809_1050
139.5
P10809_1069
84.2
P10809_1087
24.0
P10809_1110
82.8
T-reg nTPM: 81.7
Samples: 6
Max nTPM: 96.8
Min nTPM: 62.8
P10809_1018
63.5
P10809_1037
96.8
P10809_1056
82.8
P10809_1075
96.0
P10809_1094
62.8
P10809_1106
88.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
643.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 201.5
Samples: 4
Max nTPM: 296.3
Min nTPM: 113.5
RHH5202_R3573
296.3
RHH5230_R3602
122.0
RHH5259_R3631
113.5
RHH5288_R3660
274.0
Effector memory CD8 T-cell nTPM: 313.7
Samples: 4
Max nTPM: 463.1
Min nTPM: 236.7
RHH5203_R3574
463.1
RHH5231_R3603
244.0
RHH5260_R3632
236.7
RHH5289_R3661
310.9
MAIT T-cell nTPM: 202.6
Samples: 4
Max nTPM: 487.1
Min nTPM: 82.8
RHH5233_R3605
487.1
RHH5205_R3576
82.8
RHH5262_R3634
105.4
RHH5297_R3663
135.2
Memory CD4 T-cell TFH nTPM: 158.0
Samples: 4
Max nTPM: 212.2
Min nTPM: 132.8
RHH5300_R3666
133.5
RHH5236_R3608
212.2
RHH5265_R3637
132.8
RHH5208_R3579
153.6
Memory CD4 T-cell Th1 nTPM: 137.1
Samples: 4
Max nTPM: 222.0
Min nTPM: 75.3
RHH5210_R3581
114.3
RHH5302_R3668
222.0
RHH5238_R3610
75.3
RHH5267_R3639
136.7
Memory CD4 T-cell Th1/Th17 nTPM: 156.5
Samples: 4
Max nTPM: 212.4
Min nTPM: 107.5
RHH5303_R3669
212.4
RHH5211_R3582
157.1
RHH5239_R3611
149.1
RHH5268_R3640
107.5
Memory CD4 T-cell Th17 nTPM: 148.5
Samples: 4
Max nTPM: 208.8
Min nTPM: 86.3
RHH5304_R3670
167.5
RHH5212_R3583
86.3
RHH5240_R3612
208.8
RHH5269_R3641
131.2
Memory CD4 T-cell Th2 nTPM: 140.4
Samples: 4
Max nTPM: 156.4
Min nTPM: 121.9
RHH5305_R3671
152.3
RHH5213_R3584
121.9
RHH5241_R3613
156.4
RHH5270_R3642
130.9
Naive CD4 T-cell nTPM: 115.4
Samples: 4
Max nTPM: 132.2
Min nTPM: 97.9
RHH5306_R3672
112.7
RHH5214_R3585
97.9
RHH5242_R3614
132.2
RHH5271_R3643
118.9
Naive CD8 T-cell nTPM: 164.3
Samples: 4
Max nTPM: 235.6
Min nTPM: 121.4
RHH5201_R3572
235.6
RHH5229_R3601
121.4
RHH5258_R3630
139.6
RHH5287_R3659
160.6
Non-Vd2 gdTCR nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 177.5
Samples: 4
Max nTPM: 236.9
Min nTPM: 126.4
RHH5301_R3667
207.8
RHH5237_R3609
236.9
RHH5266_R3638
126.4
RHH5209_R3580
138.7
Terminal effector memory CD4 T-cell nTPM: 21.6
Samples: 2
Max nTPM: 34.3
Min nTPM: 8.8
RHH5243_R3615
8.8
RHH5272_R3644
34.3
Terminal effector memory CD8 T-cell nTPM: 643.7
Samples: 4
Max nTPM: 1890.7
Min nTPM: 81.8
RHH5232_R3604
1890.7
RHH5204_R3575
257.6
RHH5261_R3633
81.8
RHH5296_R3662
344.5
Vd2 gdTCR nTPM: 28.2
Samples: 4
Max nTPM: 45.1
Min nTPM: 0.0
RHH5234_R3606
45.1
RHH5206_R3577
0.0
RHH5263_R3635
39.4
RHH5298_R3664
28.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
