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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
54.6
nTPM
Monaco:
123.6
nTPM
Schmiedel:
80.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.6
HPA sample
nTPM
gdT-cell nTPM: 0.2
Samples: 6
Max nTPM: 0.6
Min nTPM: 0.0
P10809_1007
0.2
P10809_1022
0.6
P10809_1041
0.0
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.5
MAIT T-cell nTPM: 14.2
Samples: 6
Max nTPM: 39.1
Min nTPM: 1.8
P10809_1006
13.8
P10809_1024
11.3
P10809_1043
5.4
P10809_1062
13.9
P10809_1083
1.8
P10809_1097
39.1
Memory CD4 T-cell nTPM: 39.7
Samples: 6
Max nTPM: 43.9
Min nTPM: 35.7
P10809_1014
41.2
P10809_1026
37.8
P10809_1045
43.9
P10809_1064
42.3
P10809_1086
35.7
P10809_1113
37.0
Memory CD8 T-cell nTPM: 20.6
Samples: 5
Max nTPM: 45.2
Min nTPM: 9.6
P10809_1012
10.9
P10809_1027
19.6
P10809_1046
17.9
P10809_1065
9.6
P10809_1111
45.2
Naive CD4 T-cell nTPM: 37.8
Samples: 6
Max nTPM: 59.5
Min nTPM: 23.3
P10809_1015
32.1
P10809_1030
34.9
P10809_1049
38.8
P10809_1068
38.1
P10809_1085
59.5
P10809_1112
23.3
Naive CD8 T-cell nTPM: 16.4
Samples: 6
Max nTPM: 24.0
Min nTPM: 5.2
P10809_1016
24.0
P10809_1031
13.2
P10809_1050
14.9
P10809_1069
18.8
P10809_1087
5.2
P10809_1110
22.4
T-reg nTPM: 54.6
Samples: 6
Max nTPM: 82.1
Min nTPM: 28.4
P10809_1018
28.4
P10809_1037
44.3
P10809_1056
82.1
P10809_1075
62.3
P10809_1094
50.4
P10809_1106
59.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 83.7
Samples: 4
Max nTPM: 107.3
Min nTPM: 52.2
RHH5202_R3573
107.3
RHH5230_R3602
105.9
RHH5259_R3631
52.2
RHH5288_R3660
69.4
Effector memory CD8 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 89.3
Min nTPM: 53.4
RHH5203_R3574
80.0
RHH5231_R3603
53.4
RHH5260_R3632
89.3
RHH5289_R3661
57.1
MAIT T-cell nTPM: 27.5
Samples: 4
Max nTPM: 34.6
Min nTPM: 19.9
RHH5233_R3605
19.9
RHH5205_R3576
34.6
RHH5262_R3634
24.4
RHH5297_R3663
31.1
Memory CD4 T-cell TFH nTPM: 123.6
Samples: 4
Max nTPM: 134.5
Min nTPM: 117.3
RHH5300_R3666
117.3
RHH5236_R3608
119.5
RHH5265_R3637
123.2
RHH5208_R3579
134.5
Memory CD4 T-cell Th1 nTPM: 84.0
Samples: 4
Max nTPM: 118.4
Min nTPM: 41.3
RHH5210_R3581
118.4
RHH5302_R3668
78.2
RHH5238_R3610
41.3
RHH5267_R3639
98.1
Memory CD4 T-cell Th1/Th17 nTPM: 106.9
Samples: 4
Max nTPM: 164.1
Min nTPM: 80.2
RHH5303_R3669
101.6
RHH5211_R3582
164.1
RHH5239_R3611
80.2
RHH5268_R3640
81.6
Memory CD4 T-cell Th17 nTPM: 87.3
Samples: 4
Max nTPM: 102.8
Min nTPM: 69.5
RHH5304_R3670
69.5
RHH5212_R3583
102.8
RHH5240_R3612
93.4
RHH5269_R3641
83.4
Memory CD4 T-cell Th2 nTPM: 101.7
Samples: 4
Max nTPM: 113.9
Min nTPM: 87.4
RHH5305_R3671
105.4
RHH5213_R3584
113.9
RHH5241_R3613
99.9
RHH5270_R3642
87.4
Naive CD4 T-cell nTPM: 78.5
Samples: 4
Max nTPM: 140.2
Min nTPM: 50.9
RHH5306_R3672
50.9
RHH5214_R3585
140.2
RHH5242_R3614
55.2
RHH5271_R3643
67.5
Naive CD8 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 111.8
Min nTPM: 23.6
RHH5201_R3572
111.8
RHH5229_R3601
23.6
RHH5258_R3630
50.3
RHH5287_R3659
79.1
Non-Vd2 gdTCR nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 87.9
Samples: 4
Max nTPM: 112.0
Min nTPM: 66.4
RHH5301_R3667
79.4
RHH5237_R3609
93.7
RHH5266_R3638
66.4
RHH5209_R3580
112.0
Terminal effector memory CD4 T-cell nTPM: 14.6
Samples: 2
Max nTPM: 27.6
Min nTPM: 1.6
RHH5243_R3615
1.6
RHH5272_R3644
27.6
Terminal effector memory CD8 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 48.4
Min nTPM: 2.5
RHH5232_R3604
18.8
RHH5204_R3575
2.5
RHH5261_R3633
8.1
RHH5296_R3662
48.4
Vd2 gdTCR nTPM: 3.2
Samples: 4
Max nTPM: 5.9
Min nTPM: 0.0
RHH5234_R3606
4.2
RHH5206_R3577
0.0
RHH5263_R3635
5.9
RHH5298_R3664
2.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
