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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
252.7
nTPM
Monaco:
438.2
nTPM
Schmiedel:
177.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
252.7
HPA sample
nTPM
gdT-cell nTPM: 1.9
Samples: 6
Max nTPM: 5.1
Min nTPM: 0.0
P10809_1007
0.3
P10809_1022
5.1
P10809_1041
3.6
P10809_1060
0.1
P10809_1077
2.2
P10809_1098
0.0
MAIT T-cell nTPM: 128.9
Samples: 6
Max nTPM: 523.9
Min nTPM: 21.7
P10809_1006
523.9
P10809_1024
29.8
P10809_1043
22.2
P10809_1062
32.6
P10809_1083
143.0
P10809_1097
21.7
Memory CD4 T-cell nTPM: 206.0
Samples: 6
Max nTPM: 444.3
Min nTPM: 103.4
P10809_1014
160.0
P10809_1026
130.4
P10809_1045
266.8
P10809_1064
131.2
P10809_1086
444.3
P10809_1113
103.4
Memory CD8 T-cell nTPM: 200.0
Samples: 5
Max nTPM: 417.4
Min nTPM: 83.5
P10809_1012
228.0
P10809_1027
142.6
P10809_1046
417.4
P10809_1065
128.6
P10809_1111
83.5
Naive CD4 T-cell nTPM: 139.3
Samples: 6
Max nTPM: 238.6
Min nTPM: 87.6
P10809_1015
120.2
P10809_1030
99.3
P10809_1049
238.6
P10809_1068
144.2
P10809_1085
145.6
P10809_1112
87.6
Naive CD8 T-cell nTPM: 252.7
Samples: 6
Max nTPM: 966.6
Min nTPM: 90.5
P10809_1016
107.7
P10809_1031
91.4
P10809_1050
163.5
P10809_1069
90.5
P10809_1087
966.6
P10809_1110
96.5
T-reg nTPM: 194.7
Samples: 6
Max nTPM: 333.4
Min nTPM: 102.7
P10809_1018
177.2
P10809_1037
102.7
P10809_1056
203.5
P10809_1075
224.6
P10809_1094
333.4
P10809_1106
126.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
438.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 364.5
Samples: 4
Max nTPM: 540.5
Min nTPM: 135.5
RHH5202_R3573
540.5
RHH5230_R3602
382.2
RHH5259_R3631
135.5
RHH5288_R3660
399.6
Effector memory CD8 T-cell nTPM: 255.1
Samples: 4
Max nTPM: 543.4
Min nTPM: 112.8
RHH5203_R3574
183.4
RHH5231_R3603
543.4
RHH5260_R3632
112.8
RHH5289_R3661
180.9
MAIT T-cell nTPM: 117.6
Samples: 4
Max nTPM: 213.1
Min nTPM: 60.5
RHH5233_R3605
86.2
RHH5205_R3576
60.5
RHH5262_R3634
213.1
RHH5297_R3663
110.6
Memory CD4 T-cell TFH nTPM: 400.6
Samples: 4
Max nTPM: 461.1
Min nTPM: 330.0
RHH5300_R3666
435.6
RHH5236_R3608
461.1
RHH5265_R3637
375.5
RHH5208_R3579
330.0
Memory CD4 T-cell Th1 nTPM: 281.8
Samples: 4
Max nTPM: 384.4
Min nTPM: 197.6
RHH5210_R3581
258.1
RHH5302_R3668
384.4
RHH5238_R3610
197.6
RHH5267_R3639
286.9
Memory CD4 T-cell Th1/Th17 nTPM: 438.2
Samples: 4
Max nTPM: 723.8
Min nTPM: 235.6
RHH5303_R3669
723.8
RHH5211_R3582
334.2
RHH5239_R3611
235.6
RHH5268_R3640
459.2
Memory CD4 T-cell Th17 nTPM: 337.3
Samples: 4
Max nTPM: 431.6
Min nTPM: 297.7
RHH5304_R3670
320.7
RHH5212_R3583
431.6
RHH5240_R3612
299.1
RHH5269_R3641
297.7
Memory CD4 T-cell Th2 nTPM: 349.4
Samples: 4
Max nTPM: 407.6
Min nTPM: 275.5
RHH5305_R3671
407.6
RHH5213_R3584
313.9
RHH5241_R3613
400.4
RHH5270_R3642
275.5
Naive CD4 T-cell nTPM: 300.2
Samples: 4
Max nTPM: 338.5
Min nTPM: 220.9
RHH5306_R3672
315.8
RHH5214_R3585
338.5
RHH5242_R3614
325.5
RHH5271_R3643
220.9
Naive CD8 T-cell nTPM: 358.7
Samples: 4
Max nTPM: 433.7
Min nTPM: 222.7
RHH5201_R3572
433.7
RHH5229_R3601
378.8
RHH5258_R3630
222.7
RHH5287_R3659
399.5
Non-Vd2 gdTCR nTPM: 0.8
Samples: 4
Max nTPM: 1.8
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
1.5
RHH5207_R3578
1.8
RHH5299_R3665
0.0
T-reg nTPM: 358.8
Samples: 4
Max nTPM: 435.1
Min nTPM: 289.8
RHH5301_R3667
413.4
RHH5237_R3609
435.1
RHH5266_R3638
289.8
RHH5209_R3580
296.8
Terminal effector memory CD4 T-cell nTPM: 26.1
Samples: 2
Max nTPM: 47.6
Min nTPM: 4.6
RHH5243_R3615
4.6
RHH5272_R3644
47.6
Terminal effector memory CD8 T-cell nTPM: 89.7
Samples: 4
Max nTPM: 97.9
Min nTPM: 80.7
RHH5232_R3604
97.9
RHH5204_R3575
91.9
RHH5261_R3633
80.7
RHH5296_R3662
88.1
Vd2 gdTCR nTPM: 12.7
Samples: 4
Max nTPM: 28.2
Min nTPM: 4.9
RHH5234_R3606
4.9
RHH5206_R3577
10.8
RHH5263_R3635
28.2
RHH5298_R3664
6.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
