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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
191.1
nTPM
Monaco:
146.8
nTPM
Schmiedel:
64.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
191.1
HPA sample
nTPM
gdT-cell nTPM: 1.1
Samples: 6
Max nTPM: 3.1
Min nTPM: 0.0
P10809_1007
1.3
P10809_1022
2.1
P10809_1041
3.1
P10809_1060
0.3
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 59.2
Samples: 6
Max nTPM: 90.4
Min nTPM: 32.7
P10809_1006
67.0
P10809_1024
50.1
P10809_1043
90.4
P10809_1062
64.5
P10809_1083
50.7
P10809_1097
32.7
Memory CD4 T-cell nTPM: 143.9
Samples: 6
Max nTPM: 222.5
Min nTPM: 96.9
P10809_1014
109.2
P10809_1026
222.5
P10809_1045
211.5
P10809_1064
105.8
P10809_1086
96.9
P10809_1113
117.4
Memory CD8 T-cell nTPM: 81.1
Samples: 5
Max nTPM: 97.7
Min nTPM: 71.5
P10809_1012
88.0
P10809_1027
71.6
P10809_1046
71.5
P10809_1065
76.9
P10809_1111
97.7
Naive CD4 T-cell nTPM: 143.8
Samples: 6
Max nTPM: 251.2
Min nTPM: 86.4
P10809_1015
86.4
P10809_1030
172.9
P10809_1049
251.2
P10809_1068
139.5
P10809_1085
109.7
P10809_1112
103.0
Naive CD8 T-cell nTPM: 80.4
Samples: 6
Max nTPM: 101.1
Min nTPM: 64.7
P10809_1016
69.1
P10809_1031
88.3
P10809_1050
93.5
P10809_1069
101.1
P10809_1087
64.7
P10809_1110
65.5
T-reg nTPM: 191.1
Samples: 6
Max nTPM: 268.3
Min nTPM: 116.5
P10809_1018
116.5
P10809_1037
247.2
P10809_1056
268.3
P10809_1075
147.3
P10809_1094
186.9
P10809_1106
180.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
146.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.1
Samples: 4
Max nTPM: 103.6
Min nTPM: 49.2
RHH5202_R3573
103.6
RHH5230_R3602
49.2
RHH5259_R3631
97.8
RHH5288_R3660
85.7
Effector memory CD8 T-cell nTPM: 91.4
Samples: 4
Max nTPM: 140.6
Min nTPM: 21.5
RHH5203_R3574
140.6
RHH5231_R3603
21.5
RHH5260_R3632
138.7
RHH5289_R3661
64.8
MAIT T-cell nTPM: 73.4
Samples: 4
Max nTPM: 81.7
Min nTPM: 65.8
RHH5233_R3605
78.8
RHH5205_R3576
81.7
RHH5262_R3634
65.8
RHH5297_R3663
67.2
Memory CD4 T-cell TFH nTPM: 146.8
Samples: 4
Max nTPM: 197.2
Min nTPM: 92.1
RHH5300_R3666
138.5
RHH5236_R3608
92.1
RHH5265_R3637
159.5
RHH5208_R3579
197.2
Memory CD4 T-cell Th1 nTPM: 127.4
Samples: 4
Max nTPM: 158.8
Min nTPM: 58.6
RHH5210_R3581
136.6
RHH5302_R3668
155.6
RHH5238_R3610
58.6
RHH5267_R3639
158.8
Memory CD4 T-cell Th1/Th17 nTPM: 138.2
Samples: 4
Max nTPM: 188.0
Min nTPM: 80.8
RHH5303_R3669
140.1
RHH5211_R3582
188.0
RHH5239_R3611
80.8
RHH5268_R3640
143.9
Memory CD4 T-cell Th17 nTPM: 143.0
Samples: 4
Max nTPM: 197.1
Min nTPM: 116.1
RHH5304_R3670
116.1
RHH5212_R3583
197.1
RHH5240_R3612
123.0
RHH5269_R3641
135.9
Memory CD4 T-cell Th2 nTPM: 135.2
Samples: 4
Max nTPM: 153.7
Min nTPM: 106.4
RHH5305_R3671
153.7
RHH5213_R3584
132.3
RHH5241_R3613
106.4
RHH5270_R3642
148.5
Naive CD4 T-cell nTPM: 121.0
Samples: 4
Max nTPM: 150.4
Min nTPM: 72.4
RHH5306_R3672
150.4
RHH5214_R3585
149.4
RHH5242_R3614
72.4
RHH5271_R3643
111.6
Naive CD8 T-cell nTPM: 79.5
Samples: 4
Max nTPM: 103.7
Min nTPM: 45.0
RHH5201_R3572
65.8
RHH5229_R3601
45.0
RHH5258_R3630
103.5
RHH5287_R3659
103.7
Non-Vd2 gdTCR nTPM: 0.8
Samples: 4
Max nTPM: 1.8
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
1.8
RHH5207_R3578
0.0
RHH5299_R3665
1.2
T-reg nTPM: 144.4
Samples: 4
Max nTPM: 152.2
Min nTPM: 125.7
RHH5301_R3667
148.5
RHH5237_R3609
125.7
RHH5266_R3638
151.0
RHH5209_R3580
152.2
Terminal effector memory CD4 T-cell nTPM: 23.8
Samples: 2
Max nTPM: 43.3
Min nTPM: 4.2
RHH5243_R3615
4.2
RHH5272_R3644
43.3
Terminal effector memory CD8 T-cell nTPM: 41.5
Samples: 4
Max nTPM: 47.3
Min nTPM: 29.9
RHH5232_R3604
47.2
RHH5204_R3575
29.9
RHH5261_R3633
41.7
RHH5296_R3662
47.3
Vd2 gdTCR nTPM: 5.6
Samples: 4
Max nTPM: 11.4
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
0.8
RHH5263_R3635
11.4
RHH5298_R3664
10.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
