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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
153.7
nTPM
Monaco:
692.7
nTPM
Schmiedel:
286.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
153.7
HPA sample
nTPM
gdT-cell nTPM: 1.2
Samples: 6
Max nTPM: 5.9
Min nTPM: 0.0
P10809_1007
0.4
P10809_1022
5.9
P10809_1041
0.4
P10809_1060
0.3
P10809_1077
0.1
P10809_1098
0.0
MAIT T-cell nTPM: 29.8
Samples: 6
Max nTPM: 39.5
Min nTPM: 17.4
P10809_1006
27.5
P10809_1024
17.4
P10809_1043
29.6
P10809_1062
39.5
P10809_1083
37.8
P10809_1097
27.2
Memory CD4 T-cell nTPM: 107.0
Samples: 6
Max nTPM: 157.5
Min nTPM: 74.7
P10809_1014
90.6
P10809_1026
157.5
P10809_1045
121.3
P10809_1064
74.7
P10809_1086
84.9
P10809_1113
113.1
Memory CD8 T-cell nTPM: 48.4
Samples: 5
Max nTPM: 69.4
Min nTPM: 20.7
P10809_1012
49.9
P10809_1027
69.4
P10809_1046
42.6
P10809_1065
20.7
P10809_1111
59.6
Naive CD4 T-cell nTPM: 138.8
Samples: 6
Max nTPM: 207.8
Min nTPM: 84.8
P10809_1015
84.8
P10809_1030
155.4
P10809_1049
207.8
P10809_1068
112.1
P10809_1085
147.8
P10809_1112
125.0
Naive CD8 T-cell nTPM: 77.4
Samples: 6
Max nTPM: 154.5
Min nTPM: 45.9
P10809_1016
50.0
P10809_1031
86.5
P10809_1050
53.0
P10809_1069
45.9
P10809_1087
154.5
P10809_1110
74.2
T-reg nTPM: 153.7
Samples: 6
Max nTPM: 202.8
Min nTPM: 119.5
P10809_1018
119.5
P10809_1037
202.8
P10809_1056
153.3
P10809_1075
141.3
P10809_1094
162.2
P10809_1106
143.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
692.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 250.1
Samples: 4
Max nTPM: 321.7
Min nTPM: 154.1
RHH5202_R3573
240.4
RHH5230_R3602
154.1
RHH5259_R3631
284.3
RHH5288_R3660
321.7
Effector memory CD8 T-cell nTPM: 426.5
Samples: 4
Max nTPM: 626.7
Min nTPM: 255.4
RHH5203_R3574
626.7
RHH5231_R3603
387.1
RHH5260_R3632
436.9
RHH5289_R3661
255.4
MAIT T-cell nTPM: 222.0
Samples: 4
Max nTPM: 287.2
Min nTPM: 167.3
RHH5233_R3605
287.2
RHH5205_R3576
215.6
RHH5262_R3634
167.3
RHH5297_R3663
217.9
Memory CD4 T-cell TFH nTPM: 599.9
Samples: 4
Max nTPM: 761.5
Min nTPM: 526.5
RHH5300_R3666
563.4
RHH5236_R3608
761.5
RHH5265_R3637
526.5
RHH5208_R3579
548.2
Memory CD4 T-cell Th1 nTPM: 527.3
Samples: 4
Max nTPM: 660.0
Min nTPM: 419.1
RHH5210_R3581
592.6
RHH5302_R3668
660.0
RHH5238_R3610
419.1
RHH5267_R3639
437.4
Memory CD4 T-cell Th1/Th17 nTPM: 460.8
Samples: 4
Max nTPM: 563.1
Min nTPM: 328.6
RHH5303_R3669
552.0
RHH5211_R3582
563.1
RHH5239_R3611
328.6
RHH5268_R3640
399.6
Memory CD4 T-cell Th17 nTPM: 497.5
Samples: 4
Max nTPM: 619.3
Min nTPM: 319.8
RHH5304_R3670
508.0
RHH5212_R3583
619.3
RHH5240_R3612
542.9
RHH5269_R3641
319.8
Memory CD4 T-cell Th2 nTPM: 496.5
Samples: 4
Max nTPM: 584.1
Min nTPM: 417.8
RHH5305_R3671
540.5
RHH5213_R3584
417.8
RHH5241_R3613
584.1
RHH5270_R3642
443.5
Naive CD4 T-cell nTPM: 667.8
Samples: 4
Max nTPM: 707.2
Min nTPM: 616.1
RHH5306_R3672
681.2
RHH5214_R3585
666.7
RHH5242_R3614
707.2
RHH5271_R3643
616.1
Naive CD8 T-cell nTPM: 406.2
Samples: 4
Max nTPM: 541.9
Min nTPM: 241.4
RHH5201_R3572
541.9
RHH5229_R3601
241.4
RHH5258_R3630
411.5
RHH5287_R3659
429.9
Non-Vd2 gdTCR nTPM: 2.3
Samples: 4
Max nTPM: 4.5
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
1.5
RHH5207_R3578
4.5
RHH5299_R3665
3.2
T-reg nTPM: 692.7
Samples: 4
Max nTPM: 940.6
Min nTPM: 486.0
RHH5301_R3667
807.9
RHH5237_R3609
940.6
RHH5266_R3638
486.0
RHH5209_R3580
536.2
Terminal effector memory CD4 T-cell nTPM: 68.2
Samples: 2
Max nTPM: 124.8
Min nTPM: 11.5
RHH5243_R3615
11.5
RHH5272_R3644
124.8
Terminal effector memory CD8 T-cell nTPM: 400.2
Samples: 4
Max nTPM: 562.7
Min nTPM: 124.3
RHH5232_R3604
562.7
RHH5204_R3575
386.0
RHH5261_R3633
124.3
RHH5296_R3662
527.8
Vd2 gdTCR nTPM: 26.7
Samples: 4
Max nTPM: 47.1
Min nTPM: 17.2
RHH5234_R3606
22.3
RHH5206_R3577
17.2
RHH5263_R3635
47.1
RHH5298_R3664
20.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
