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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.7
nTPM
Monaco:
330.1
nTPM
Schmiedel:
243.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.7
HPA sample
nTPM
gdT-cell nTPM: 1.2
Samples: 6
Max nTPM: 4.3
Min nTPM: 0.0
P10809_1007
0.5
P10809_1022
4.3
P10809_1041
2.0
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.4
MAIT T-cell nTPM: 5.7
Samples: 6
Max nTPM: 7.6
Min nTPM: 4.1
P10809_1006
4.3
P10809_1024
7.1
P10809_1043
4.3
P10809_1062
6.8
P10809_1083
4.1
P10809_1097
7.6
Memory CD4 T-cell nTPM: 102.3
Samples: 6
Max nTPM: 139.4
Min nTPM: 71.8
P10809_1014
71.8
P10809_1026
107.2
P10809_1045
98.3
P10809_1064
139.4
P10809_1086
118.5
P10809_1113
78.7
Memory CD8 T-cell nTPM: 87.7
Samples: 5
Max nTPM: 140.7
Min nTPM: 57.9
P10809_1012
80.9
P10809_1027
97.2
P10809_1046
61.8
P10809_1065
140.7
P10809_1111
57.9
Naive CD4 T-cell nTPM: 90.7
Samples: 6
Max nTPM: 156.6
Min nTPM: 62.3
P10809_1015
74.6
P10809_1030
69.6
P10809_1049
95.5
P10809_1068
85.4
P10809_1085
156.6
P10809_1112
62.3
Naive CD8 T-cell nTPM: 65.5
Samples: 6
Max nTPM: 91.2
Min nTPM: 43.5
P10809_1016
91.2
P10809_1031
88.4
P10809_1050
56.7
P10809_1069
43.7
P10809_1087
43.5
P10809_1110
69.3
T-reg nTPM: 143.7
Samples: 6
Max nTPM: 203.6
Min nTPM: 97.4
P10809_1018
146.1
P10809_1037
97.4
P10809_1056
203.6
P10809_1075
119.0
P10809_1094
159.0
P10809_1106
137.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
330.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 193.7
Samples: 4
Max nTPM: 280.6
Min nTPM: 123.4
RHH5202_R3573
227.4
RHH5230_R3602
143.4
RHH5259_R3631
123.4
RHH5288_R3660
280.6
Effector memory CD8 T-cell nTPM: 231.8
Samples: 4
Max nTPM: 421.5
Min nTPM: 144.1
RHH5203_R3574
421.5
RHH5231_R3603
183.3
RHH5260_R3632
144.1
RHH5289_R3661
178.2
MAIT T-cell nTPM: 17.6
Samples: 4
Max nTPM: 29.1
Min nTPM: 7.8
RHH5233_R3605
8.3
RHH5205_R3576
29.1
RHH5262_R3634
7.8
RHH5297_R3663
25.3
Memory CD4 T-cell TFH nTPM: 181.5
Samples: 4
Max nTPM: 223.8
Min nTPM: 146.9
RHH5300_R3666
197.8
RHH5236_R3608
146.9
RHH5265_R3637
157.5
RHH5208_R3579
223.8
Memory CD4 T-cell Th1 nTPM: 143.7
Samples: 4
Max nTPM: 228.8
Min nTPM: 82.7
RHH5210_R3581
166.5
RHH5302_R3668
228.8
RHH5238_R3610
82.7
RHH5267_R3639
96.7
Memory CD4 T-cell Th1/Th17 nTPM: 144.0
Samples: 4
Max nTPM: 284.4
Min nTPM: 39.0
RHH5303_R3669
284.4
RHH5211_R3582
167.7
RHH5239_R3611
39.0
RHH5268_R3640
84.9
Memory CD4 T-cell Th17 nTPM: 172.5
Samples: 4
Max nTPM: 231.1
Min nTPM: 93.5
RHH5304_R3670
231.1
RHH5212_R3583
224.3
RHH5240_R3612
141.1
RHH5269_R3641
93.5
Memory CD4 T-cell Th2 nTPM: 144.5
Samples: 4
Max nTPM: 201.8
Min nTPM: 95.5
RHH5305_R3671
201.8
RHH5213_R3584
138.1
RHH5241_R3613
142.6
RHH5270_R3642
95.5
Naive CD4 T-cell nTPM: 119.1
Samples: 4
Max nTPM: 162.8
Min nTPM: 60.8
RHH5306_R3672
160.2
RHH5214_R3585
162.8
RHH5242_R3614
92.5
RHH5271_R3643
60.8
Naive CD8 T-cell nTPM: 166.8
Samples: 4
Max nTPM: 203.5
Min nTPM: 88.1
RHH5201_R3572
203.5
RHH5229_R3601
88.1
RHH5258_R3630
201.8
RHH5287_R3659
173.9
Non-Vd2 gdTCR nTPM: 0.3
Samples: 4
Max nTPM: 1.0
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
1.0
RHH5299_R3665
0.0
T-reg nTPM: 180.6
Samples: 4
Max nTPM: 222.7
Min nTPM: 113.2
RHH5301_R3667
222.7
RHH5237_R3609
204.0
RHH5266_R3638
113.2
RHH5209_R3580
182.6
Terminal effector memory CD4 T-cell nTPM: 15.1
Samples: 2
Max nTPM: 30.1
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
30.1
Terminal effector memory CD8 T-cell nTPM: 330.1
Samples: 4
Max nTPM: 789.5
Min nTPM: 33.2
RHH5232_R3604
33.2
RHH5204_R3575
282.2
RHH5261_R3633
215.4
RHH5296_R3662
789.5
Vd2 gdTCR nTPM: 13.6
Samples: 4
Max nTPM: 31.4
Min nTPM: 2.5
RHH5234_R3606
3.4
RHH5206_R3577
2.5
RHH5263_R3635
17.1
RHH5298_R3664
31.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
