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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.2
nTPM
Monaco:
1457.6
nTPM
Schmiedel:
81.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.2
HPA sample
nTPM
gdT-cell nTPM: 2.2
Samples: 6
Max nTPM: 5.4
Min nTPM: 0.0
P10809_1007
1.6
P10809_1022
3.5
P10809_1041
2.1
P10809_1060
0.8
P10809_1077
0.0
P10809_1098
5.4
MAIT T-cell nTPM: 33.0
Samples: 6
Max nTPM: 64.0
Min nTPM: 10.1
P10809_1006
64.0
P10809_1024
32.2
P10809_1043
29.8
P10809_1062
31.7
P10809_1083
10.1
P10809_1097
30.3
Memory CD4 T-cell nTPM: 94.4
Samples: 6
Max nTPM: 114.0
Min nTPM: 73.6
P10809_1014
114.0
P10809_1026
79.7
P10809_1045
109.5
P10809_1064
73.6
P10809_1086
98.0
P10809_1113
91.3
Memory CD8 T-cell nTPM: 57.4
Samples: 5
Max nTPM: 93.6
Min nTPM: 29.9
P10809_1012
63.9
P10809_1027
64.6
P10809_1046
34.9
P10809_1065
29.9
P10809_1111
93.6
Naive CD4 T-cell nTPM: 102.2
Samples: 6
Max nTPM: 133.1
Min nTPM: 85.3
P10809_1015
101.2
P10809_1030
133.1
P10809_1049
121.0
P10809_1068
85.3
P10809_1085
87.3
P10809_1112
85.5
Naive CD8 T-cell nTPM: 114.6
Samples: 6
Max nTPM: 300.7
Min nTPM: 37.3
P10809_1016
79.6
P10809_1031
92.1
P10809_1050
97.7
P10809_1069
37.3
P10809_1087
300.7
P10809_1110
80.0
T-reg nTPM: 115.2
Samples: 6
Max nTPM: 182.7
Min nTPM: 68.2
P10809_1018
68.2
P10809_1037
182.7
P10809_1056
125.3
P10809_1075
115.2
P10809_1094
102.5
P10809_1106
97.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1457.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 89.5
Samples: 4
Max nTPM: 133.8
Min nTPM: 56.3
RHH5202_R3573
80.1
RHH5230_R3602
56.3
RHH5259_R3631
87.6
RHH5288_R3660
133.8
Effector memory CD8 T-cell nTPM: 116.4
Samples: 4
Max nTPM: 151.2
Min nTPM: 84.1
RHH5203_R3574
98.3
RHH5231_R3603
151.2
RHH5260_R3632
84.1
RHH5289_R3661
131.8
MAIT T-cell nTPM: 54.9
Samples: 4
Max nTPM: 83.5
Min nTPM: 29.6
RHH5233_R3605
49.8
RHH5205_R3576
29.6
RHH5262_R3634
83.5
RHH5297_R3663
56.5
Memory CD4 T-cell TFH nTPM: 198.7
Samples: 4
Max nTPM: 281.4
Min nTPM: 155.1
RHH5300_R3666
195.8
RHH5236_R3608
281.4
RHH5265_R3637
162.3
RHH5208_R3579
155.1
Memory CD4 T-cell Th1 nTPM: 183.2
Samples: 4
Max nTPM: 213.5
Min nTPM: 140.2
RHH5210_R3581
176.5
RHH5302_R3668
202.6
RHH5238_R3610
213.5
RHH5267_R3639
140.2
Memory CD4 T-cell Th1/Th17 nTPM: 192.8
Samples: 4
Max nTPM: 286.1
Min nTPM: 129.6
RHH5303_R3669
195.5
RHH5211_R3582
286.1
RHH5239_R3611
129.6
RHH5268_R3640
159.8
Memory CD4 T-cell Th17 nTPM: 182.8
Samples: 4
Max nTPM: 266.3
Min nTPM: 115.2
RHH5304_R3670
164.4
RHH5212_R3583
266.3
RHH5240_R3612
185.4
RHH5269_R3641
115.2
Memory CD4 T-cell Th2 nTPM: 149.5
Samples: 4
Max nTPM: 193.5
Min nTPM: 107.9
RHH5305_R3671
181.1
RHH5213_R3584
107.9
RHH5241_R3613
193.5
RHH5270_R3642
115.5
Naive CD4 T-cell nTPM: 198.3
Samples: 4
Max nTPM: 255.8
Min nTPM: 126.0
RHH5306_R3672
196.8
RHH5214_R3585
214.6
RHH5242_R3614
255.8
RHH5271_R3643
126.0
Naive CD8 T-cell nTPM: 136.6
Samples: 4
Max nTPM: 177.4
Min nTPM: 93.4
RHH5201_R3572
177.4
RHH5229_R3601
93.4
RHH5258_R3630
117.6
RHH5287_R3659
157.8
Non-Vd2 gdTCR nTPM: 1.0
Samples: 4
Max nTPM: 3.3
Min nTPM: 0.0
RHH5235_R3607
0.6
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
3.3
T-reg nTPM: 194.7
Samples: 4
Max nTPM: 274.0
Min nTPM: 124.5
RHH5301_R3667
195.3
RHH5237_R3609
274.0
RHH5266_R3638
185.1
RHH5209_R3580
124.5
Terminal effector memory CD4 T-cell nTPM: 1457.6
Samples: 2
Max nTPM: 2826.7
Min nTPM: 88.5
RHH5243_R3615
2826.7
RHH5272_R3644
88.5
Terminal effector memory CD8 T-cell nTPM: 183.4
Samples: 4
Max nTPM: 314.7
Min nTPM: 58.3
RHH5232_R3604
201.3
RHH5204_R3575
58.3
RHH5261_R3633
314.7
RHH5296_R3662
159.2
Vd2 gdTCR nTPM: 12.0
Samples: 4
Max nTPM: 23.6
Min nTPM: 4.4
RHH5234_R3606
15.3
RHH5206_R3577
4.4
RHH5263_R3635
23.6
RHH5298_R3664
4.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
