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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
125.4
nTPM
Monaco:
152.1
nTPM
Schmiedel:
119.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.4
HPA sample
nTPM
gdT-cell nTPM: 0.4
Samples: 6
Max nTPM: 1.8
Min nTPM: 0.0
P10809_1007
0.0
P10809_1022
1.8
P10809_1041
0.1
P10809_1060
0.2
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 17.9
Samples: 6
Max nTPM: 28.8
Min nTPM: 12.5
P10809_1006
17.5
P10809_1024
12.8
P10809_1043
28.8
P10809_1062
12.5
P10809_1083
18.4
P10809_1097
17.6
Memory CD4 T-cell nTPM: 89.6
Samples: 6
Max nTPM: 108.3
Min nTPM: 64.9
P10809_1014
77.9
P10809_1026
105.0
P10809_1045
108.3
P10809_1064
100.8
P10809_1086
64.9
P10809_1113
80.7
Memory CD8 T-cell nTPM: 64.2
Samples: 5
Max nTPM: 106.5
Min nTPM: 16.8
P10809_1012
106.5
P10809_1027
59.2
P10809_1046
94.8
P10809_1065
16.8
P10809_1111
43.8
Naive CD4 T-cell nTPM: 92.9
Samples: 6
Max nTPM: 136.4
Min nTPM: 63.6
P10809_1015
63.6
P10809_1030
107.6
P10809_1049
136.4
P10809_1068
94.7
P10809_1085
72.1
P10809_1112
82.9
Naive CD8 T-cell nTPM: 38.9
Samples: 6
Max nTPM: 57.5
Min nTPM: 13.4
P10809_1016
50.9
P10809_1031
57.5
P10809_1050
45.5
P10809_1069
13.4
P10809_1087
24.2
P10809_1110
41.6
T-reg nTPM: 125.4
Samples: 6
Max nTPM: 158.2
Min nTPM: 90.2
P10809_1018
90.2
P10809_1037
158.2
P10809_1056
117.6
P10809_1075
114.0
P10809_1094
155.4
P10809_1106
117.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 109.0
Samples: 4
Max nTPM: 117.6
Min nTPM: 96.3
RHH5202_R3573
107.3
RHH5230_R3602
114.7
RHH5259_R3631
96.3
RHH5288_R3660
117.6
Effector memory CD8 T-cell nTPM: 85.1
Samples: 4
Max nTPM: 137.5
Min nTPM: 48.9
RHH5203_R3574
48.9
RHH5231_R3603
71.4
RHH5260_R3632
137.5
RHH5289_R3661
82.4
MAIT T-cell nTPM: 23.6
Samples: 4
Max nTPM: 36.8
Min nTPM: 2.6
RHH5233_R3605
22.4
RHH5205_R3576
2.6
RHH5262_R3634
32.5
RHH5297_R3663
36.8
Memory CD4 T-cell TFH nTPM: 152.1
Samples: 4
Max nTPM: 177.1
Min nTPM: 138.5
RHH5300_R3666
153.7
RHH5236_R3608
177.1
RHH5265_R3637
138.5
RHH5208_R3579
139.1
Memory CD4 T-cell Th1 nTPM: 124.4
Samples: 4
Max nTPM: 146.4
Min nTPM: 71.3
RHH5210_R3581
137.4
RHH5302_R3668
146.4
RHH5238_R3610
71.3
RHH5267_R3639
142.3
Memory CD4 T-cell Th1/Th17 nTPM: 126.4
Samples: 4
Max nTPM: 181.0
Min nTPM: 62.0
RHH5303_R3669
181.0
RHH5211_R3582
160.8
RHH5239_R3611
62.0
RHH5268_R3640
101.8
Memory CD4 T-cell Th17 nTPM: 114.2
Samples: 4
Max nTPM: 153.1
Min nTPM: 76.0
RHH5304_R3670
124.9
RHH5212_R3583
153.1
RHH5240_R3612
76.0
RHH5269_R3641
102.6
Memory CD4 T-cell Th2 nTPM: 108.6
Samples: 4
Max nTPM: 122.5
Min nTPM: 94.6
RHH5305_R3671
122.5
RHH5213_R3584
94.6
RHH5241_R3613
105.8
RHH5270_R3642
111.6
Naive CD4 T-cell nTPM: 130.4
Samples: 4
Max nTPM: 140.3
Min nTPM: 120.2
RHH5306_R3672
131.3
RHH5214_R3585
120.2
RHH5242_R3614
129.6
RHH5271_R3643
140.3
Naive CD8 T-cell nTPM: 72.2
Samples: 4
Max nTPM: 89.4
Min nTPM: 60.4
RHH5201_R3572
63.9
RHH5229_R3601
75.0
RHH5258_R3630
60.4
RHH5287_R3659
89.4
Non-Vd2 gdTCR nTPM: 0.3
Samples: 4
Max nTPM: 1.1
Min nTPM: 0.0
RHH5235_R3607
1.1
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 140.7
Samples: 4
Max nTPM: 160.2
Min nTPM: 107.0
RHH5301_R3667
150.3
RHH5237_R3609
107.0
RHH5266_R3638
160.2
RHH5209_R3580
145.3
Terminal effector memory CD4 T-cell nTPM: 11.5
Samples: 2
Max nTPM: 22.2
Min nTPM: 0.8
RHH5243_R3615
0.8
RHH5272_R3644
22.2
Terminal effector memory CD8 T-cell nTPM: 51.8
Samples: 4
Max nTPM: 134.3
Min nTPM: 12.6
RHH5232_R3604
29.4
RHH5204_R3575
12.6
RHH5261_R3633
31.0
RHH5296_R3662
134.3
Vd2 gdTCR nTPM: 6.1
Samples: 4
Max nTPM: 13.5
Min nTPM: 0.0
RHH5234_R3606
2.7
RHH5206_R3577
0.0
RHH5263_R3635
13.5
RHH5298_R3664
8.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
