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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.3
nTPM
Monaco:
219.2
nTPM
Schmiedel:
81.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.3
HPA sample
nTPM
gdT-cell nTPM: 0.2
Samples: 6
Max nTPM: 1.3
Min nTPM: 0.0
P10809_1007
0.1
P10809_1022
1.3
P10809_1041
0.0
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 11.9
Samples: 6
Max nTPM: 21.2
Min nTPM: 3.8
P10809_1006
3.8
P10809_1024
13.1
P10809_1043
13.3
P10809_1062
10.4
P10809_1083
9.8
P10809_1097
21.2
Memory CD4 T-cell nTPM: 45.8
Samples: 6
Max nTPM: 58.4
Min nTPM: 28.2
P10809_1014
51.8
P10809_1026
58.4
P10809_1045
50.5
P10809_1064
28.2
P10809_1086
35.5
P10809_1113
50.6
Memory CD8 T-cell nTPM: 18.2
Samples: 5
Max nTPM: 26.9
Min nTPM: 6.2
P10809_1012
26.9
P10809_1027
21.4
P10809_1046
16.1
P10809_1065
6.2
P10809_1111
20.3
Naive CD4 T-cell nTPM: 48.2
Samples: 6
Max nTPM: 58.8
Min nTPM: 29.2
P10809_1015
47.6
P10809_1030
54.5
P10809_1049
58.8
P10809_1068
50.8
P10809_1085
29.2
P10809_1112
48.5
Naive CD8 T-cell nTPM: 22.4
Samples: 6
Max nTPM: 32.7
Min nTPM: 6.8
P10809_1016
32.7
P10809_1031
26.8
P10809_1050
27.4
P10809_1069
17.8
P10809_1087
6.8
P10809_1110
23.1
T-reg nTPM: 58.3
Samples: 6
Max nTPM: 96.1
Min nTPM: 39.1
P10809_1018
46.9
P10809_1037
46.4
P10809_1056
53.1
P10809_1075
96.1
P10809_1094
68.3
P10809_1106
39.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
219.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 124.5
Min nTPM: 50.6
RHH5202_R3573
96.9
RHH5230_R3602
50.6
RHH5259_R3631
65.1
RHH5288_R3660
124.5
Effector memory CD8 T-cell nTPM: 115.6
Samples: 4
Max nTPM: 216.0
Min nTPM: 39.0
RHH5203_R3574
74.3
RHH5231_R3603
39.0
RHH5260_R3632
216.0
RHH5289_R3661
133.0
MAIT T-cell nTPM: 59.5
Samples: 4
Max nTPM: 97.3
Min nTPM: 4.6
RHH5233_R3605
4.6
RHH5205_R3576
68.3
RHH5262_R3634
67.8
RHH5297_R3663
97.3
Memory CD4 T-cell TFH nTPM: 209.3
Samples: 4
Max nTPM: 285.0
Min nTPM: 163.4
RHH5300_R3666
213.6
RHH5236_R3608
163.4
RHH5265_R3637
175.2
RHH5208_R3579
285.0
Memory CD4 T-cell Th1 nTPM: 126.2
Samples: 4
Max nTPM: 188.1
Min nTPM: 90.4
RHH5210_R3581
90.4
RHH5302_R3668
188.1
RHH5238_R3610
113.3
RHH5267_R3639
112.9
Memory CD4 T-cell Th1/Th17 nTPM: 219.2
Samples: 4
Max nTPM: 411.5
Min nTPM: 120.2
RHH5303_R3669
411.5
RHH5211_R3582
196.9
RHH5239_R3611
120.2
RHH5268_R3640
148.2
Memory CD4 T-cell Th17 nTPM: 189.6
Samples: 4
Max nTPM: 239.0
Min nTPM: 144.9
RHH5304_R3670
239.0
RHH5212_R3583
180.0
RHH5240_R3612
194.6
RHH5269_R3641
144.9
Memory CD4 T-cell Th2 nTPM: 214.3
Samples: 4
Max nTPM: 281.4
Min nTPM: 139.9
RHH5305_R3671
250.3
RHH5213_R3584
139.9
RHH5241_R3613
281.4
RHH5270_R3642
185.6
Naive CD4 T-cell nTPM: 193.1
Samples: 4
Max nTPM: 263.8
Min nTPM: 146.5
RHH5306_R3672
263.8
RHH5214_R3585
151.6
RHH5242_R3614
210.5
RHH5271_R3643
146.5
Naive CD8 T-cell nTPM: 77.9
Samples: 4
Max nTPM: 116.3
Min nTPM: 53.2
RHH5201_R3572
69.1
RHH5229_R3601
53.2
RHH5258_R3630
73.0
RHH5287_R3659
116.3
Non-Vd2 gdTCR nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 145.2
Samples: 4
Max nTPM: 203.1
Min nTPM: 98.7
RHH5301_R3667
203.1
RHH5237_R3609
148.1
RHH5266_R3638
98.7
RHH5209_R3580
130.8
Terminal effector memory CD4 T-cell nTPM: 9.0
Samples: 2
Max nTPM: 18.0
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
18.0
Terminal effector memory CD8 T-cell nTPM: 80.3
Samples: 4
Max nTPM: 197.3
Min nTPM: 27.3
RHH5232_R3604
29.8
RHH5204_R3575
66.9
RHH5261_R3633
27.3
RHH5296_R3662
197.3
Vd2 gdTCR nTPM: 11.5
Samples: 4
Max nTPM: 20.9
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
20.9
RHH5263_R3635
17.8
RHH5298_R3664
7.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
