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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.7
nTPM
Monaco:
230.3
nTPM
Schmiedel:
153.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.7
HPA sample
nTPM
gdT-cell nTPM: 0.7
Samples: 6
Max nTPM: 1.3
Min nTPM: 0.0
P10809_1007
0.1
P10809_1022
1.2
P10809_1041
0.9
P10809_1060
0.8
P10809_1077
0.0
P10809_1098
1.3
MAIT T-cell nTPM: 3.9
Samples: 6
Max nTPM: 6.7
Min nTPM: 0.0
P10809_1006
3.2
P10809_1024
6.7
P10809_1043
5.4
P10809_1062
3.2
P10809_1083
4.8
P10809_1097
0.0
Memory CD4 T-cell nTPM: 81.7
Samples: 6
Max nTPM: 136.3
Min nTPM: 47.8
P10809_1014
71.0
P10809_1026
98.0
P10809_1045
53.4
P10809_1064
136.3
P10809_1086
47.8
P10809_1113
83.8
Memory CD8 T-cell nTPM: 63.7
Samples: 5
Max nTPM: 78.3
Min nTPM: 46.6
P10809_1012
65.2
P10809_1027
73.4
P10809_1046
46.6
P10809_1065
78.3
P10809_1111
55.0
Naive CD4 T-cell nTPM: 62.0
Samples: 6
Max nTPM: 75.8
Min nTPM: 49.7
P10809_1015
65.3
P10809_1030
72.7
P10809_1049
75.8
P10809_1068
51.0
P10809_1085
49.7
P10809_1112
57.7
Naive CD8 T-cell nTPM: 53.4
Samples: 6
Max nTPM: 68.0
Min nTPM: 32.1
P10809_1016
52.3
P10809_1031
61.9
P10809_1050
47.4
P10809_1069
32.1
P10809_1087
68.0
P10809_1110
58.7
T-reg nTPM: 116.7
Samples: 6
Max nTPM: 142.2
Min nTPM: 72.2
P10809_1018
72.2
P10809_1037
130.2
P10809_1056
141.3
P10809_1075
97.1
P10809_1094
117.2
P10809_1106
142.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
230.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.9
Samples: 4
Max nTPM: 195.7
Min nTPM: 71.9
RHH5202_R3573
181.4
RHH5230_R3602
71.9
RHH5259_R3631
90.5
RHH5288_R3660
195.7
Effector memory CD8 T-cell nTPM: 230.3
Samples: 4
Max nTPM: 579.6
Min nTPM: 92.2
RHH5203_R3574
150.9
RHH5231_R3603
579.6
RHH5260_R3632
98.6
RHH5289_R3661
92.2
MAIT T-cell nTPM: 19.7
Samples: 4
Max nTPM: 41.7
Min nTPM: 0.7
RHH5233_R3605
0.7
RHH5205_R3576
25.7
RHH5262_R3634
10.7
RHH5297_R3663
41.7
Memory CD4 T-cell TFH nTPM: 178.6
Samples: 4
Max nTPM: 214.5
Min nTPM: 155.1
RHH5300_R3666
155.1
RHH5236_R3608
214.5
RHH5265_R3637
187.7
RHH5208_R3579
157.1
Memory CD4 T-cell Th1 nTPM: 127.6
Samples: 4
Max nTPM: 138.5
Min nTPM: 116.0
RHH5210_R3581
119.5
RHH5302_R3668
116.0
RHH5238_R3610
138.5
RHH5267_R3639
136.3
Memory CD4 T-cell Th1/Th17 nTPM: 139.9
Samples: 4
Max nTPM: 182.6
Min nTPM: 86.5
RHH5303_R3669
182.6
RHH5211_R3582
162.5
RHH5239_R3611
86.5
RHH5268_R3640
127.9
Memory CD4 T-cell Th17 nTPM: 128.0
Samples: 4
Max nTPM: 190.4
Min nTPM: 89.4
RHH5304_R3670
119.1
RHH5212_R3583
113.1
RHH5240_R3612
190.4
RHH5269_R3641
89.4
Memory CD4 T-cell Th2 nTPM: 150.4
Samples: 4
Max nTPM: 167.8
Min nTPM: 127.5
RHH5305_R3671
167.8
RHH5213_R3584
127.5
RHH5241_R3613
157.4
RHH5270_R3642
148.7
Naive CD4 T-cell nTPM: 130.6
Samples: 4
Max nTPM: 162.4
Min nTPM: 101.9
RHH5306_R3672
125.8
RHH5214_R3585
101.9
RHH5242_R3614
162.4
RHH5271_R3643
132.4
Naive CD8 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 128.4
Min nTPM: 77.8
RHH5201_R3572
88.9
RHH5229_R3601
77.8
RHH5258_R3630
97.2
RHH5287_R3659
128.4
Non-Vd2 gdTCR nTPM: 0.6
Samples: 4
Max nTPM: 2.4
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
2.4
T-reg nTPM: 157.9
Samples: 4
Max nTPM: 213.5
Min nTPM: 136.2
RHH5301_R3667
145.3
RHH5237_R3609
213.5
RHH5266_R3638
136.4
RHH5209_R3580
136.2
Terminal effector memory CD4 T-cell nTPM: 16.0
Samples: 2
Max nTPM: 27.2
Min nTPM: 4.8
RHH5243_R3615
4.8
RHH5272_R3644
27.2
Terminal effector memory CD8 T-cell nTPM: 70.1
Samples: 4
Max nTPM: 138.8
Min nTPM: 22.8
RHH5232_R3604
70.6
RHH5204_R3575
22.8
RHH5261_R3633
138.8
RHH5296_R3662
48.0
Vd2 gdTCR nTPM: 7.2
Samples: 4
Max nTPM: 9.5
Min nTPM: 5.3
RHH5234_R3606
5.8
RHH5206_R3577
5.3
RHH5263_R3635
9.5
RHH5298_R3664
8.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
