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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
45.6
nTPM
Monaco:
237.4
nTPM
Schmiedel:
388.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.6
HPA sample
nTPM
gdT-cell nTPM: 1.1
Samples: 6
Max nTPM: 2.5
Min nTPM: 0.0
P10809_1007
1.2
P10809_1022
2.5
P10809_1041
0.0
P10809_1060
0.7
P10809_1077
0.8
P10809_1098
1.4
MAIT T-cell nTPM: 2.6
Samples: 6
Max nTPM: 5.7
Min nTPM: 1.3
P10809_1006
2.2
P10809_1024
5.7
P10809_1043
1.3
P10809_1062
1.6
P10809_1083
3.1
P10809_1097
1.8
Memory CD4 T-cell nTPM: 17.9
Samples: 6
Max nTPM: 25.9
Min nTPM: 10.7
P10809_1014
25.9
P10809_1026
10.7
P10809_1045
22.4
P10809_1064
14.5
P10809_1086
12.0
P10809_1113
21.8
Memory CD8 T-cell nTPM: 45.6
Samples: 5
Max nTPM: 70.0
Min nTPM: 31.0
P10809_1012
31.0
P10809_1027
49.4
P10809_1046
70.0
P10809_1065
45.3
P10809_1111
32.4
Naive CD4 T-cell nTPM: 23.3
Samples: 6
Max nTPM: 29.2
Min nTPM: 13.8
P10809_1015
29.2
P10809_1030
27.5
P10809_1049
25.7
P10809_1068
20.5
P10809_1085
13.8
P10809_1112
23.3
Naive CD8 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 37.1
Min nTPM: 8.2
P10809_1016
37.1
P10809_1031
22.9
P10809_1050
17.1
P10809_1069
30.6
P10809_1087
8.2
P10809_1110
31.7
T-reg nTPM: 24.0
Samples: 6
Max nTPM: 41.5
Min nTPM: 12.6
P10809_1018
41.5
P10809_1037
16.3
P10809_1056
12.6
P10809_1075
25.1
P10809_1094
20.9
P10809_1106
27.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
237.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.2
Samples: 4
Max nTPM: 179.3
Min nTPM: 80.0
RHH5202_R3573
179.3
RHH5230_R3602
80.0
RHH5259_R3631
80.2
RHH5288_R3660
85.3
Effector memory CD8 T-cell nTPM: 164.9
Samples: 4
Max nTPM: 309.2
Min nTPM: 87.6
RHH5203_R3574
309.2
RHH5231_R3603
158.2
RHH5260_R3632
104.6
RHH5289_R3661
87.6
MAIT T-cell nTPM: 19.9
Samples: 4
Max nTPM: 42.5
Min nTPM: 3.0
RHH5233_R3605
3.0
RHH5205_R3576
42.5
RHH5262_R3634
13.5
RHH5297_R3663
20.6
Memory CD4 T-cell TFH nTPM: 50.3
Samples: 4
Max nTPM: 59.1
Min nTPM: 43.5
RHH5300_R3666
52.0
RHH5236_R3608
43.5
RHH5265_R3637
59.1
RHH5208_R3579
46.4
Memory CD4 T-cell Th1 nTPM: 54.7
Samples: 4
Max nTPM: 78.5
Min nTPM: 32.4
RHH5210_R3581
78.5
RHH5302_R3668
50.8
RHH5238_R3610
32.4
RHH5267_R3639
57.1
Memory CD4 T-cell Th1/Th17 nTPM: 65.3
Samples: 4
Max nTPM: 79.5
Min nTPM: 50.1
RHH5303_R3669
79.5
RHH5211_R3582
65.8
RHH5239_R3611
50.1
RHH5268_R3640
65.8
Memory CD4 T-cell Th17 nTPM: 63.4
Samples: 4
Max nTPM: 83.3
Min nTPM: 41.8
RHH5304_R3670
83.3
RHH5212_R3583
77.5
RHH5240_R3612
51.1
RHH5269_R3641
41.8
Memory CD4 T-cell Th2 nTPM: 61.3
Samples: 4
Max nTPM: 76.6
Min nTPM: 42.7
RHH5305_R3671
64.3
RHH5213_R3584
61.4
RHH5241_R3613
42.7
RHH5270_R3642
76.6
Naive CD4 T-cell nTPM: 56.2
Samples: 4
Max nTPM: 75.8
Min nTPM: 34.5
RHH5306_R3672
53.2
RHH5214_R3585
75.8
RHH5242_R3614
61.3
RHH5271_R3643
34.5
Naive CD8 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 158.5
Min nTPM: 54.1
RHH5201_R3572
158.5
RHH5229_R3601
54.1
RHH5258_R3630
77.2
RHH5287_R3659
78.5
Non-Vd2 gdTCR nTPM: 2.9
Samples: 4
Max nTPM: 6.5
Min nTPM: 0.0
RHH5235_R3607
6.5
RHH5264_R3636
3.3
RHH5207_R3578
1.9
RHH5299_R3665
0.0
T-reg nTPM: 65.6
Samples: 4
Max nTPM: 75.9
Min nTPM: 52.6
RHH5301_R3667
75.9
RHH5237_R3609
65.7
RHH5266_R3638
68.0
RHH5209_R3580
52.6
Terminal effector memory CD4 T-cell nTPM: 13.7
Samples: 2
Max nTPM: 21.8
Min nTPM: 5.6
RHH5243_R3615
5.6
RHH5272_R3644
21.8
Terminal effector memory CD8 T-cell nTPM: 237.3
Samples: 4
Max nTPM: 625.9
Min nTPM: 25.7
RHH5232_R3604
25.7
RHH5204_R3575
262.7
RHH5261_R3633
625.9
RHH5296_R3662
35.0
Vd2 gdTCR nTPM: 14.3
Samples: 4
Max nTPM: 45.5
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
0.0
RHH5263_R3635
45.5
RHH5298_R3664
11.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
