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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
393.4
nTPM
Monaco:
612.0
nTPM
Schmiedel:
135.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
393.4
HPA sample
nTPM
gdT-cell nTPM: 1.7
Samples: 6
Max nTPM: 3.6
Min nTPM: 0.4
P10809_1007
0.4
P10809_1022
3.1
P10809_1041
3.6
P10809_1060
0.4
P10809_1077
1.2
P10809_1098
1.7
MAIT T-cell nTPM: 17.4
Samples: 6
Max nTPM: 30.7
Min nTPM: 2.8
P10809_1006
19.5
P10809_1024
13.3
P10809_1043
18.8
P10809_1062
30.7
P10809_1083
2.8
P10809_1097
19.3
Memory CD4 T-cell nTPM: 221.2
Samples: 6
Max nTPM: 302.8
Min nTPM: 164.8
P10809_1014
194.4
P10809_1026
218.0
P10809_1045
302.8
P10809_1064
214.4
P10809_1086
164.8
P10809_1113
233.0
Memory CD8 T-cell nTPM: 233.8
Samples: 5
Max nTPM: 346.3
Min nTPM: 91.9
P10809_1012
276.9
P10809_1027
139.2
P10809_1046
346.3
P10809_1065
91.9
P10809_1111
314.6
Naive CD4 T-cell nTPM: 199.4
Samples: 6
Max nTPM: 328.3
Min nTPM: 124.7
P10809_1015
124.7
P10809_1030
230.7
P10809_1049
328.3
P10809_1068
157.3
P10809_1085
144.8
P10809_1112
210.7
Naive CD8 T-cell nTPM: 205.5
Samples: 6
Max nTPM: 413.2
Min nTPM: 71.7
P10809_1016
194.1
P10809_1031
203.2
P10809_1050
413.2
P10809_1069
112.0
P10809_1087
71.7
P10809_1110
238.8
T-reg nTPM: 393.4
Samples: 6
Max nTPM: 622.6
Min nTPM: 274.6
P10809_1018
307.7
P10809_1037
274.6
P10809_1056
622.6
P10809_1075
377.2
P10809_1094
495.2
P10809_1106
282.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
612.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 294.8
Samples: 4
Max nTPM: 446.2
Min nTPM: 184.7
RHH5202_R3573
286.0
RHH5230_R3602
184.7
RHH5259_R3631
262.1
RHH5288_R3660
446.2
Effector memory CD8 T-cell nTPM: 612.0
Samples: 4
Max nTPM: 1279.3
Min nTPM: 280.8
RHH5203_R3574
491.9
RHH5231_R3603
395.8
RHH5260_R3632
280.8
RHH5289_R3661
1279.3
MAIT T-cell nTPM: 78.3
Samples: 4
Max nTPM: 218.6
Min nTPM: 26.4
RHH5233_R3605
31.0
RHH5205_R3576
26.4
RHH5262_R3634
218.6
RHH5297_R3663
37.2
Memory CD4 T-cell TFH nTPM: 421.2
Samples: 4
Max nTPM: 500.8
Min nTPM: 293.2
RHH5300_R3666
452.7
RHH5236_R3608
500.8
RHH5265_R3637
293.2
RHH5208_R3579
438.1
Memory CD4 T-cell Th1 nTPM: 291.9
Samples: 4
Max nTPM: 432.8
Min nTPM: 207.5
RHH5210_R3581
289.2
RHH5302_R3668
432.8
RHH5238_R3610
207.5
RHH5267_R3639
237.9
Memory CD4 T-cell Th1/Th17 nTPM: 455.1
Samples: 4
Max nTPM: 843.8
Min nTPM: 212.6
RHH5303_R3669
843.8
RHH5211_R3582
526.5
RHH5239_R3611
237.6
RHH5268_R3640
212.6
Memory CD4 T-cell Th17 nTPM: 333.3
Samples: 4
Max nTPM: 429.1
Min nTPM: 202.6
RHH5304_R3670
369.4
RHH5212_R3583
429.1
RHH5240_R3612
332.1
RHH5269_R3641
202.6
Memory CD4 T-cell Th2 nTPM: 385.1
Samples: 4
Max nTPM: 519.5
Min nTPM: 318.6
RHH5305_R3671
519.5
RHH5213_R3584
318.6
RHH5241_R3613
371.9
RHH5270_R3642
330.3
Naive CD4 T-cell nTPM: 296.2
Samples: 4
Max nTPM: 409.7
Min nTPM: 216.3
RHH5306_R3672
409.7
RHH5214_R3585
301.0
RHH5242_R3614
216.3
RHH5271_R3643
257.7
Naive CD8 T-cell nTPM: 290.6
Samples: 4
Max nTPM: 342.8
Min nTPM: 146.3
RHH5201_R3572
342.8
RHH5229_R3601
146.3
RHH5258_R3630
339.0
RHH5287_R3659
334.3
Non-Vd2 gdTCR nTPM: 4.6
Samples: 4
Max nTPM: 10.1
Min nTPM: 0.0
RHH5235_R3607
10.1
RHH5264_R3636
0.0
RHH5207_R3578
3.5
RHH5299_R3665
4.8
T-reg nTPM: 355.2
Samples: 4
Max nTPM: 563.2
Min nTPM: 195.6
RHH5301_R3667
384.4
RHH5237_R3609
563.2
RHH5266_R3638
277.6
RHH5209_R3580
195.6
Terminal effector memory CD4 T-cell nTPM: 60.8
Samples: 2
Max nTPM: 110.1
Min nTPM: 11.4
RHH5243_R3615
11.4
RHH5272_R3644
110.1
Terminal effector memory CD8 T-cell nTPM: 261.9
Samples: 4
Max nTPM: 535.5
Min nTPM: 84.0
RHH5232_R3604
535.5
RHH5204_R3575
208.6
RHH5261_R3633
84.0
RHH5296_R3662
219.5
Vd2 gdTCR nTPM: 25.6
Samples: 4
Max nTPM: 41.6
Min nTPM: 4.2
RHH5234_R3606
29.0
RHH5206_R3577
4.2
RHH5263_R3635
27.7
RHH5298_R3664
41.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
