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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.8
nTPM
Monaco:
69.2
nTPM
Schmiedel:
37.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.8
HPA sample
nTPM
gdT-cell nTPM: 6.1
Samples: 6
Max nTPM: 8.9
Min nTPM: 1.3
P10809_1007
8.9
P10809_1022
6.1
P10809_1041
6.4
P10809_1060
6.1
P10809_1077
1.3
P10809_1098
7.5
MAIT T-cell nTPM: 2.9
Samples: 6
Max nTPM: 5.4
Min nTPM: 1.1
P10809_1006
1.6
P10809_1024
3.1
P10809_1043
1.1
P10809_1062
5.4
P10809_1083
3.3
P10809_1097
3.0
Memory CD4 T-cell nTPM: 35.4
Samples: 6
Max nTPM: 44.9
Min nTPM: 24.9
P10809_1014
41.0
P10809_1026
39.7
P10809_1045
44.9
P10809_1064
24.9
P10809_1086
29.8
P10809_1113
31.8
Memory CD8 T-cell nTPM: 18.3
Samples: 5
Max nTPM: 38.7
Min nTPM: 7.7
P10809_1012
38.7
P10809_1027
12.0
P10809_1046
12.5
P10809_1065
7.7
P10809_1111
20.7
Naive CD4 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 36.8
Min nTPM: 22.2
P10809_1015
31.2
P10809_1030
36.8
P10809_1049
35.8
P10809_1068
31.9
P10809_1085
22.2
P10809_1112
30.4
Naive CD8 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 27.6
Min nTPM: 7.7
P10809_1016
27.6
P10809_1031
23.8
P10809_1050
18.9
P10809_1069
10.0
P10809_1087
7.7
P10809_1110
24.6
T-reg nTPM: 59.8
Samples: 6
Max nTPM: 77.3
Min nTPM: 47.7
P10809_1018
60.6
P10809_1037
50.8
P10809_1056
52.5
P10809_1075
47.7
P10809_1094
69.9
P10809_1106
77.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.6
Samples: 4
Max nTPM: 52.4
Min nTPM: 23.5
RHH5202_R3573
52.4
RHH5230_R3602
23.5
RHH5259_R3631
42.2
RHH5288_R3660
48.2
Effector memory CD8 T-cell nTPM: 69.3
Samples: 4
Max nTPM: 152.4
Min nTPM: 11.4
RHH5203_R3574
11.4
RHH5231_R3603
84.6
RHH5260_R3632
28.6
RHH5289_R3661
152.4
MAIT T-cell nTPM: 6.0
Samples: 4
Max nTPM: 11.6
Min nTPM: 0.7
RHH5233_R3605
3.0
RHH5205_R3576
11.6
RHH5262_R3634
0.7
RHH5297_R3663
8.8
Memory CD4 T-cell TFH nTPM: 65.0
Samples: 4
Max nTPM: 75.8
Min nTPM: 43.5
RHH5300_R3666
70.8
RHH5236_R3608
69.9
RHH5265_R3637
43.5
RHH5208_R3579
75.8
Memory CD4 T-cell Th1 nTPM: 51.0
Samples: 4
Max nTPM: 76.4
Min nTPM: 29.9
RHH5210_R3581
32.6
RHH5302_R3668
76.4
RHH5238_R3610
29.9
RHH5267_R3639
65.0
Memory CD4 T-cell Th1/Th17 nTPM: 45.1
Samples: 4
Max nTPM: 65.0
Min nTPM: 28.7
RHH5303_R3669
65.0
RHH5211_R3582
42.1
RHH5239_R3611
28.7
RHH5268_R3640
44.5
Memory CD4 T-cell Th17 nTPM: 45.9
Samples: 4
Max nTPM: 60.2
Min nTPM: 34.9
RHH5304_R3670
44.4
RHH5212_R3583
60.2
RHH5240_R3612
34.9
RHH5269_R3641
44.1
Memory CD4 T-cell Th2 nTPM: 47.5
Samples: 4
Max nTPM: 73.2
Min nTPM: 37.4
RHH5305_R3671
73.2
RHH5213_R3584
37.4
RHH5241_R3613
39.7
RHH5270_R3642
39.7
Naive CD4 T-cell nTPM: 33.4
Samples: 4
Max nTPM: 36.1
Min nTPM: 27.7
RHH5306_R3672
35.9
RHH5214_R3585
27.7
RHH5242_R3614
36.1
RHH5271_R3643
33.7
Naive CD8 T-cell nTPM: 24.1
Samples: 4
Max nTPM: 35.6
Min nTPM: 14.6
RHH5201_R3572
35.6
RHH5229_R3601
14.6
RHH5258_R3630
24.7
RHH5287_R3659
21.5
Non-Vd2 gdTCR nTPM: 11.1
Samples: 4
Max nTPM: 20.4
Min nTPM: 6.7
RHH5235_R3607
20.4
RHH5264_R3636
8.5
RHH5207_R3578
6.7
RHH5299_R3665
8.7
T-reg nTPM: 53.9
Samples: 4
Max nTPM: 64.9
Min nTPM: 42.2
RHH5301_R3667
56.3
RHH5237_R3609
64.9
RHH5266_R3638
42.2
RHH5209_R3580
52.0
Terminal effector memory CD4 T-cell nTPM: 9.4
Samples: 2
Max nTPM: 18.8
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
18.8
Terminal effector memory CD8 T-cell nTPM: 56.9
Samples: 4
Max nTPM: 166.3
Min nTPM: 5.3
RHH5232_R3604
25.1
RHH5204_R3575
30.9
RHH5261_R3633
5.3
RHH5296_R3662
166.3
Vd2 gdTCR nTPM: 10.1
Samples: 4
Max nTPM: 19.0
Min nTPM: 2.3
RHH5234_R3606
2.5
RHH5206_R3577
2.3
RHH5263_R3635
16.5
RHH5298_R3664
19.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
