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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.5
nTPM
Monaco:
110.3
nTPM
Schmiedel:
62.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.5
HPA sample
nTPM
gdT-cell nTPM: 0.5
Samples: 6
Max nTPM: 2.6
Min nTPM: 0.0
P10809_1007
0.3
P10809_1022
2.6
P10809_1041
0.0
P10809_1060
0.0
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 0.1
Samples: 6
Max nTPM: 0.4
Min nTPM: 0.0
P10809_1006
0.0
P10809_1024
0.0
P10809_1043
0.0
P10809_1062
0.0
P10809_1083
0.1
P10809_1097
0.4
Memory CD4 T-cell nTPM: 33.6
Samples: 6
Max nTPM: 42.3
Min nTPM: 16.4
P10809_1014
42.3
P10809_1026
40.8
P10809_1045
36.3
P10809_1064
16.4
P10809_1086
31.8
P10809_1113
34.1
Memory CD8 T-cell nTPM: 20.9
Samples: 5
Max nTPM: 39.1
Min nTPM: 6.4
P10809_1012
32.1
P10809_1027
39.1
P10809_1046
6.4
P10809_1065
10.9
P10809_1111
15.8
Naive CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 40.8
Min nTPM: 28.0
P10809_1015
40.8
P10809_1030
30.3
P10809_1049
36.3
P10809_1068
31.0
P10809_1085
28.0
P10809_1112
30.1
Naive CD8 T-cell nTPM: 22.6
Samples: 6
Max nTPM: 50.3
Min nTPM: 3.8
P10809_1016
29.3
P10809_1031
50.3
P10809_1050
24.3
P10809_1069
11.3
P10809_1087
3.8
P10809_1110
16.8
T-reg nTPM: 49.5
Samples: 6
Max nTPM: 64.8
Min nTPM: 27.2
P10809_1018
42.2
P10809_1037
62.0
P10809_1056
64.8
P10809_1075
27.2
P10809_1094
55.8
P10809_1106
45.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 81.5
Min nTPM: 52.5
RHH5202_R3573
52.5
RHH5230_R3602
55.7
RHH5259_R3631
54.3
RHH5288_R3660
81.5
Effector memory CD8 T-cell nTPM: 47.0
Samples: 4
Max nTPM: 58.4
Min nTPM: 26.3
RHH5203_R3574
26.3
RHH5231_R3603
51.3
RHH5260_R3632
51.9
RHH5289_R3661
58.4
MAIT T-cell nTPM: 5.8
Samples: 4
Max nTPM: 11.7
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
5.9
RHH5262_R3634
5.7
RHH5297_R3663
11.7
Memory CD4 T-cell TFH nTPM: 110.3
Samples: 4
Max nTPM: 148.2
Min nTPM: 72.0
RHH5300_R3666
95.9
RHH5236_R3608
148.2
RHH5265_R3637
72.0
RHH5208_R3579
125.0
Memory CD4 T-cell Th1 nTPM: 71.8
Samples: 4
Max nTPM: 99.7
Min nTPM: 56.2
RHH5210_R3581
57.7
RHH5302_R3668
99.7
RHH5238_R3610
56.2
RHH5267_R3639
73.6
Memory CD4 T-cell Th1/Th17 nTPM: 63.3
Samples: 4
Max nTPM: 83.8
Min nTPM: 36.3
RHH5303_R3669
83.8
RHH5211_R3582
69.5
RHH5239_R3611
63.4
RHH5268_R3640
36.3
Memory CD4 T-cell Th17 nTPM: 87.6
Samples: 4
Max nTPM: 109.2
Min nTPM: 58.0
RHH5304_R3670
85.1
RHH5212_R3583
109.2
RHH5240_R3612
98.1
RHH5269_R3641
58.0
Memory CD4 T-cell Th2 nTPM: 84.2
Samples: 4
Max nTPM: 118.3
Min nTPM: 51.7
RHH5305_R3671
118.3
RHH5213_R3584
51.7
RHH5241_R3613
75.8
RHH5270_R3642
90.9
Naive CD4 T-cell nTPM: 85.9
Samples: 4
Max nTPM: 120.0
Min nTPM: 63.3
RHH5306_R3672
120.0
RHH5214_R3585
63.3
RHH5242_R3614
73.4
RHH5271_R3643
86.9
Naive CD8 T-cell nTPM: 70.8
Samples: 4
Max nTPM: 86.5
Min nTPM: 61.2
RHH5201_R3572
61.2
RHH5229_R3601
73.5
RHH5258_R3630
62.1
RHH5287_R3659
86.5
Non-Vd2 gdTCR nTPM: 0.9
Samples: 4
Max nTPM: 3.4
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
3.4
T-reg nTPM: 99.3
Samples: 4
Max nTPM: 160.2
Min nTPM: 56.6
RHH5301_R3667
103.4
RHH5237_R3609
160.2
RHH5266_R3638
76.9
RHH5209_R3580
56.6
Terminal effector memory CD4 T-cell nTPM: 18.3
Samples: 2
Max nTPM: 36.6
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
36.6
Terminal effector memory CD8 T-cell nTPM: 60.3
Samples: 4
Max nTPM: 158.1
Min nTPM: 3.4
RHH5232_R3604
47.8
RHH5204_R3575
3.4
RHH5261_R3633
158.1
RHH5296_R3662
32.0
Vd2 gdTCR nTPM: 6.1
Samples: 4
Max nTPM: 14.1
Min nTPM: 0.0
RHH5234_R3606
14.1
RHH5206_R3577
0.0
RHH5263_R3635
8.1
RHH5298_R3664
2.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
