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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.3
nTPM
Monaco:
136.1
nTPM
Schmiedel:
92.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.3
HPA sample
nTPM
gdT-cell nTPM: 3.3
Samples: 6
Max nTPM: 11.0
Min nTPM: 0.0
P10809_1007
8.3
P10809_1022
11.0
P10809_1041
0.0
P10809_1060
0.4
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 0.3
Samples: 6
Max nTPM: 1.9
Min nTPM: 0.0
P10809_1006
0.0
P10809_1024
0.0
P10809_1043
1.9
P10809_1062
0.0
P10809_1083
0.0
P10809_1097
0.0
Memory CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 145.4
Min nTPM: 36.6
P10809_1014
66.2
P10809_1026
44.4
P10809_1045
109.7
P10809_1064
145.4
P10809_1086
36.6
P10809_1113
61.7
Memory CD8 T-cell nTPM: 19.2
Samples: 5
Max nTPM: 37.5
Min nTPM: 8.4
P10809_1012
19.4
P10809_1027
12.0
P10809_1046
37.5
P10809_1065
8.4
P10809_1111
18.5
Naive CD4 T-cell nTPM: 74.4
Samples: 6
Max nTPM: 98.3
Min nTPM: 58.5
P10809_1015
74.1
P10809_1030
59.7
P10809_1049
98.3
P10809_1068
82.1
P10809_1085
58.5
P10809_1112
73.8
Naive CD8 T-cell nTPM: 31.1
Samples: 6
Max nTPM: 47.9
Min nTPM: 19.1
P10809_1016
38.2
P10809_1031
32.0
P10809_1050
28.4
P10809_1069
21.0
P10809_1087
19.1
P10809_1110
47.9
T-reg nTPM: 71.3
Samples: 6
Max nTPM: 105.7
Min nTPM: 27.5
P10809_1018
74.0
P10809_1037
31.2
P10809_1056
88.8
P10809_1075
27.5
P10809_1094
100.6
P10809_1106
105.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.4
Samples: 4
Max nTPM: 205.9
Min nTPM: 13.6
RHH5202_R3573
38.3
RHH5230_R3602
13.6
RHH5259_R3631
43.7
RHH5288_R3660
205.9
Effector memory CD8 T-cell nTPM: 81.6
Samples: 4
Max nTPM: 192.8
Min nTPM: 16.4
RHH5203_R3574
16.4
RHH5231_R3603
38.5
RHH5260_R3632
78.6
RHH5289_R3661
192.8
MAIT T-cell nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
0.0
RHH5262_R3634
0.0
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 131.5
Samples: 4
Max nTPM: 174.9
Min nTPM: 83.9
RHH5300_R3666
174.9
RHH5236_R3608
159.9
RHH5265_R3637
83.9
RHH5208_R3579
107.1
Memory CD4 T-cell Th1 nTPM: 116.2
Samples: 4
Max nTPM: 187.5
Min nTPM: 66.8
RHH5210_R3581
131.2
RHH5302_R3668
187.5
RHH5238_R3610
79.2
RHH5267_R3639
66.8
Memory CD4 T-cell Th1/Th17 nTPM: 136.1
Samples: 4
Max nTPM: 262.5
Min nTPM: 74.2
RHH5303_R3669
262.5
RHH5211_R3582
126.4
RHH5239_R3611
81.4
RHH5268_R3640
74.2
Memory CD4 T-cell Th17 nTPM: 127.8
Samples: 4
Max nTPM: 196.4
Min nTPM: 89.0
RHH5304_R3670
196.4
RHH5212_R3583
125.4
RHH5240_R3612
100.2
RHH5269_R3641
89.0
Memory CD4 T-cell Th2 nTPM: 134.7
Samples: 4
Max nTPM: 162.6
Min nTPM: 105.0
RHH5305_R3671
162.6
RHH5213_R3584
130.5
RHH5241_R3613
140.6
RHH5270_R3642
105.0
Naive CD4 T-cell nTPM: 135.5
Samples: 4
Max nTPM: 177.1
Min nTPM: 102.3
RHH5306_R3672
177.1
RHH5214_R3585
121.8
RHH5242_R3614
140.8
RHH5271_R3643
102.3
Naive CD8 T-cell nTPM: 75.8
Samples: 4
Max nTPM: 102.2
Min nTPM: 50.9
RHH5201_R3572
102.2
RHH5229_R3601
50.9
RHH5258_R3630
56.4
RHH5287_R3659
93.6
Non-Vd2 gdTCR nTPM: 6.7
Samples: 4
Max nTPM: 18.7
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
3.2
RHH5207_R3578
18.7
RHH5299_R3665
5.0
T-reg nTPM: 118.9
Samples: 4
Max nTPM: 162.8
Min nTPM: 103.7
RHH5301_R3667
162.8
RHH5237_R3609
104.6
RHH5266_R3638
104.4
RHH5209_R3580
103.7
Terminal effector memory CD4 T-cell nTPM: 34.9
Samples: 2
Max nTPM: 67.7
Min nTPM: 2.1
RHH5243_R3615
2.1
RHH5272_R3644
67.7
Terminal effector memory CD8 T-cell nTPM: 31.2
Samples: 4
Max nTPM: 73.5
Min nTPM: 1.6
RHH5232_R3604
21.4
RHH5204_R3575
1.6
RHH5261_R3633
28.4
RHH5296_R3662
73.5
Vd2 gdTCR nTPM: 7.0
Samples: 4
Max nTPM: 13.3
Min nTPM: 3.4
RHH5234_R3606
6.0
RHH5206_R3577
13.3
RHH5263_R3635
5.2
RHH5298_R3664
3.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
