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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3231.7
nTPM
Monaco:
5126.7
nTPM
Schmiedel:
1.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3231.7
HPA sample
nTPM
gdT-cell nTPM: 3231.7
Samples: 6
Max nTPM: 5528.0
Min nTPM: 1751.1
P10809_1007
2671.0
P10809_1022
5528.0
P10809_1041
4102.2
P10809_1060
1843.6
P10809_1077
1751.1
P10809_1098
3494.4
MAIT T-cell nTPM: 1.6
Samples: 6
Max nTPM: 2.9
Min nTPM: 0.7
P10809_1006
0.7
P10809_1024
2.8
P10809_1043
2.9
P10809_1062
1.1
P10809_1083
0.7
P10809_1097
1.3
Memory CD4 T-cell nTPM: 1.9
Samples: 6
Max nTPM: 4.1
Min nTPM: 0.1
P10809_1014
2.6
P10809_1026
2.1
P10809_1045
4.1
P10809_1064
0.9
P10809_1086
0.1
P10809_1113
1.4
Memory CD8 T-cell nTPM: 14.7
Samples: 5
Max nTPM: 66.0
Min nTPM: 0.0
P10809_1012
66.0
P10809_1027
2.5
P10809_1046
1.9
P10809_1065
3.1
P10809_1111
0.0
Naive CD4 T-cell nTPM: 1.7
Samples: 6
Max nTPM: 3.0
Min nTPM: 0.0
P10809_1015
1.1
P10809_1030
3.0
P10809_1049
2.5
P10809_1068
1.8
P10809_1085
0.0
P10809_1112
1.8
Naive CD8 T-cell nTPM: 4.2
Samples: 6
Max nTPM: 13.4
Min nTPM: 0.1
P10809_1016
13.4
P10809_1031
0.1
P10809_1050
1.4
P10809_1069
6.0
P10809_1087
2.0
P10809_1110
2.3
T-reg nTPM: 5.9
Samples: 6
Max nTPM: 18.5
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.5
P10809_1056
11.3
P10809_1075
2.8
P10809_1094
2.2
P10809_1106
18.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
5126.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2.4
Samples: 4
Max nTPM: 6.3
Min nTPM: 0.0
RHH5202_R3573
0.0
RHH5230_R3602
6.3
RHH5259_R3631
0.0
RHH5288_R3660
3.4
Effector memory CD8 T-cell nTPM: 1.5
Samples: 4
Max nTPM: 5.8
Min nTPM: 0.0
RHH5203_R3574
0.0
RHH5231_R3603
5.8
RHH5260_R3632
0.0
RHH5289_R3661
0.0
MAIT T-cell nTPM: 0.1
Samples: 4
Max nTPM: 0.5
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
0.0
RHH5262_R3634
0.5
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 21.4
Samples: 4
Max nTPM: 71.6
Min nTPM: 2.4
RHH5300_R3666
2.9
RHH5236_R3608
8.7
RHH5265_R3637
2.4
RHH5208_R3579
71.6
Memory CD4 T-cell Th1 nTPM: 15.5
Samples: 4
Max nTPM: 31.2
Min nTPM: 2.3
RHH5210_R3581
31.2
RHH5302_R3668
25.3
RHH5238_R3610
2.3
RHH5267_R3639
3.1
Memory CD4 T-cell Th1/Th17 nTPM: 24.3
Samples: 4
Max nTPM: 63.3
Min nTPM: 6.9
RHH5303_R3669
15.1
RHH5211_R3582
63.3
RHH5239_R3611
11.9
RHH5268_R3640
6.9
Memory CD4 T-cell Th17 nTPM: 12.2
Samples: 4
Max nTPM: 30.6
Min nTPM: 2.9
RHH5304_R3670
3.7
RHH5212_R3583
30.6
RHH5240_R3612
11.5
RHH5269_R3641
2.9
Memory CD4 T-cell Th2 nTPM: 16.4
Samples: 4
Max nTPM: 32.6
Min nTPM: 4.5
RHH5305_R3671
23.4
RHH5213_R3584
32.6
RHH5241_R3613
5.0
RHH5270_R3642
4.5
Naive CD4 T-cell nTPM: 23.7
Samples: 4
Max nTPM: 45.8
Min nTPM: 0.5
RHH5306_R3672
36.0
RHH5214_R3585
45.8
RHH5242_R3614
12.3
RHH5271_R3643
0.5
Naive CD8 T-cell nTPM: 0.6
Samples: 4
Max nTPM: 1.6
Min nTPM: 0.0
RHH5201_R3572
0.8
RHH5229_R3601
0.0
RHH5258_R3630
1.6
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 441.7
Samples: 4
Max nTPM: 984.1
Min nTPM: 124.5
RHH5235_R3607
418.3
RHH5264_R3636
124.5
RHH5207_R3578
239.7
RHH5299_R3665
984.1
T-reg nTPM: 13.5
Samples: 4
Max nTPM: 43.4
Min nTPM: 0.8
RHH5301_R3667
6.1
RHH5237_R3609
0.8
RHH5266_R3638
3.7
RHH5209_R3580
43.4
Terminal effector memory CD4 T-cell nTPM: 1.9
Samples: 2
Max nTPM: 3.3
Min nTPM: 0.4
RHH5243_R3615
0.4
RHH5272_R3644
3.3
Terminal effector memory CD8 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 35.1
Min nTPM: 0.0
RHH5232_R3604
6.8
RHH5204_R3575
0.0
RHH5261_R3633
0.0
RHH5296_R3662
35.1
Vd2 gdTCR nTPM: 5126.7
Samples: 4
Max nTPM: 8002.8
Min nTPM: 3304.4
RHH5234_R3606
4547.7
RHH5206_R3577
8002.8
RHH5263_R3635
3304.4
RHH5298_R3664
4651.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
