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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
216.8
nTPM
Monaco:
380.3
nTPM
Schmiedel:
49.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
216.8
HPA sample
nTPM
gdT-cell nTPM: 216.8
Samples: 6
Max nTPM: 331.2
Min nTPM: 140.3
P10809_1007
140.3
P10809_1022
240.6
P10809_1041
331.2
P10809_1060
166.0
P10809_1077
253.6
P10809_1098
169.1
MAIT T-cell nTPM: 3.9
Samples: 6
Max nTPM: 9.0
Min nTPM: 0.0
P10809_1006
7.7
P10809_1024
5.6
P10809_1043
9.0
P10809_1062
0.0
P10809_1083
0.0
P10809_1097
1.1
Memory CD4 T-cell nTPM: 215.3
Samples: 6
Max nTPM: 504.4
Min nTPM: 114.8
P10809_1014
123.1
P10809_1026
181.1
P10809_1045
187.1
P10809_1064
504.4
P10809_1086
114.8
P10809_1113
181.2
Memory CD8 T-cell nTPM: 64.6
Samples: 5
Max nTPM: 78.9
Min nTPM: 34.9
P10809_1012
62.7
P10809_1027
70.6
P10809_1046
78.9
P10809_1065
34.9
P10809_1111
75.8
Naive CD4 T-cell nTPM: 161.4
Samples: 6
Max nTPM: 199.4
Min nTPM: 105.2
P10809_1015
105.2
P10809_1030
151.5
P10809_1049
199.4
P10809_1068
184.7
P10809_1085
144.1
P10809_1112
183.4
Naive CD8 T-cell nTPM: 81.1
Samples: 6
Max nTPM: 153.6
Min nTPM: 29.5
P10809_1016
71.3
P10809_1031
153.6
P10809_1050
82.1
P10809_1069
46.2
P10809_1087
29.5
P10809_1110
103.7
T-reg nTPM: 193.3
Samples: 6
Max nTPM: 234.1
Min nTPM: 137.9
P10809_1018
173.1
P10809_1037
200.3
P10809_1056
203.7
P10809_1075
137.9
P10809_1094
234.1
P10809_1106
210.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
380.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 137.2
Samples: 4
Max nTPM: 250.6
Min nTPM: 71.0
RHH5202_R3573
114.2
RHH5230_R3602
71.0
RHH5259_R3631
113.1
RHH5288_R3660
250.6
Effector memory CD8 T-cell nTPM: 208.2
Samples: 4
Max nTPM: 410.2
Min nTPM: 56.6
RHH5203_R3574
103.8
RHH5231_R3603
262.1
RHH5260_R3632
56.6
RHH5289_R3661
410.2
MAIT T-cell nTPM: 3.5
Samples: 4
Max nTPM: 14.0
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
0.0
RHH5262_R3634
0.0
RHH5297_R3663
14.0
Memory CD4 T-cell TFH nTPM: 222.4
Samples: 4
Max nTPM: 275.4
Min nTPM: 143.2
RHH5300_R3666
275.4
RHH5236_R3608
143.2
RHH5265_R3637
195.8
RHH5208_R3579
275.0
Memory CD4 T-cell Th1 nTPM: 220.0
Samples: 4
Max nTPM: 319.2
Min nTPM: 75.8
RHH5210_R3581
75.8
RHH5302_R3668
319.2
RHH5238_R3610
195.9
RHH5267_R3639
289.1
Memory CD4 T-cell Th1/Th17 nTPM: 209.4
Samples: 4
Max nTPM: 295.0
Min nTPM: 122.8
RHH5303_R3669
295.0
RHH5211_R3582
122.8
RHH5239_R3611
213.9
RHH5268_R3640
205.9
Memory CD4 T-cell Th17 nTPM: 157.7
Samples: 4
Max nTPM: 230.4
Min nTPM: 92.7
RHH5304_R3670
230.4
RHH5212_R3583
92.7
RHH5240_R3612
155.3
RHH5269_R3641
152.2
Memory CD4 T-cell Th2 nTPM: 211.1
Samples: 4
Max nTPM: 315.6
Min nTPM: 105.9
RHH5305_R3671
315.6
RHH5213_R3584
105.9
RHH5241_R3613
286.2
RHH5270_R3642
136.8
Naive CD4 T-cell nTPM: 270.1
Samples: 4
Max nTPM: 387.6
Min nTPM: 160.0
RHH5306_R3672
261.7
RHH5214_R3585
160.0
RHH5242_R3614
387.6
RHH5271_R3643
271.0
Naive CD8 T-cell nTPM: 194.5
Samples: 4
Max nTPM: 358.5
Min nTPM: 34.8
RHH5201_R3572
34.8
RHH5229_R3601
358.5
RHH5258_R3630
220.6
RHH5287_R3659
164.0
Non-Vd2 gdTCR nTPM: 358.6
Samples: 4
Max nTPM: 498.0
Min nTPM: 182.1
RHH5235_R3607
498.0
RHH5264_R3636
310.2
RHH5207_R3578
182.1
RHH5299_R3665
444.2
T-reg nTPM: 236.9
Samples: 4
Max nTPM: 349.2
Min nTPM: 152.4
RHH5301_R3667
349.2
RHH5237_R3609
219.8
RHH5266_R3638
226.2
RHH5209_R3580
152.4
Terminal effector memory CD4 T-cell nTPM: 79.6
Samples: 2
Max nTPM: 159.2
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
159.2
Terminal effector memory CD8 T-cell nTPM: 86.3
Samples: 4
Max nTPM: 134.8
Min nTPM: 32.1
RHH5232_R3604
32.1
RHH5204_R3575
113.1
RHH5261_R3633
65.2
RHH5296_R3662
134.8
Vd2 gdTCR nTPM: 380.3
Samples: 4
Max nTPM: 594.4
Min nTPM: 191.6
RHH5234_R3606
530.3
RHH5206_R3577
191.6
RHH5263_R3635
204.8
RHH5298_R3664
594.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
