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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
244.9
nTPM
Monaco:
225.0
nTPM
Schmiedel:
50.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
244.9
HPA sample
nTPM
gdT-cell nTPM: 23.1
Samples: 6
Max nTPM: 40.1
Min nTPM: 5.8
P10809_1007
40.1
P10809_1022
23.2
P10809_1041
39.0
P10809_1060
17.9
P10809_1077
5.8
P10809_1098
12.5
MAIT T-cell nTPM: 11.3
Samples: 6
Max nTPM: 28.3
Min nTPM: 1.0
P10809_1006
28.3
P10809_1024
13.2
P10809_1043
6.9
P10809_1062
1.0
P10809_1083
8.1
P10809_1097
10.0
Memory CD4 T-cell nTPM: 132.1
Samples: 6
Max nTPM: 172.1
Min nTPM: 98.6
P10809_1014
172.1
P10809_1026
165.1
P10809_1045
104.2
P10809_1064
111.9
P10809_1086
98.6
P10809_1113
140.9
Memory CD8 T-cell nTPM: 93.4
Samples: 5
Max nTPM: 132.1
Min nTPM: 73.9
P10809_1012
98.2
P10809_1027
88.5
P10809_1046
74.5
P10809_1065
73.9
P10809_1111
132.1
Naive CD4 T-cell nTPM: 137.5
Samples: 6
Max nTPM: 176.8
Min nTPM: 113.3
P10809_1015
127.1
P10809_1030
150.7
P10809_1049
142.2
P10809_1068
113.3
P10809_1085
115.0
P10809_1112
176.8
Naive CD8 T-cell nTPM: 86.5
Samples: 6
Max nTPM: 116.2
Min nTPM: 49.2
P10809_1016
116.2
P10809_1031
110.8
P10809_1050
86.7
P10809_1069
76.6
P10809_1087
49.2
P10809_1110
79.4
T-reg nTPM: 244.9
Samples: 6
Max nTPM: 281.1
Min nTPM: 201.6
P10809_1018
281.1
P10809_1037
201.6
P10809_1056
270.8
P10809_1075
232.7
P10809_1094
222.5
P10809_1106
260.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 150.5
Samples: 4
Max nTPM: 202.1
Min nTPM: 81.6
RHH5202_R3573
81.6
RHH5230_R3602
202.1
RHH5259_R3631
119.8
RHH5288_R3660
198.6
Effector memory CD8 T-cell nTPM: 118.9
Samples: 4
Max nTPM: 171.2
Min nTPM: 63.6
RHH5203_R3574
90.6
RHH5231_R3603
63.6
RHH5260_R3632
171.2
RHH5289_R3661
150.2
MAIT T-cell nTPM: 11.0
Samples: 4
Max nTPM: 29.0
Min nTPM: 0.0
RHH5233_R3605
29.0
RHH5205_R3576
0.0
RHH5262_R3634
0.0
RHH5297_R3663
14.8
Memory CD4 T-cell TFH nTPM: 198.1
Samples: 4
Max nTPM: 291.9
Min nTPM: 115.3
RHH5300_R3666
157.3
RHH5236_R3608
227.7
RHH5265_R3637
291.9
RHH5208_R3579
115.3
Memory CD4 T-cell Th1 nTPM: 173.7
Samples: 4
Max nTPM: 342.1
Min nTPM: 93.1
RHH5210_R3581
93.1
RHH5302_R3668
342.1
RHH5238_R3610
142.4
RHH5267_R3639
117.1
Memory CD4 T-cell Th1/Th17 nTPM: 161.3
Samples: 4
Max nTPM: 255.6
Min nTPM: 105.0
RHH5303_R3669
255.6
RHH5211_R3582
105.0
RHH5239_R3611
154.6
RHH5268_R3640
130.0
Memory CD4 T-cell Th17 nTPM: 173.1
Samples: 4
Max nTPM: 186.7
Min nTPM: 162.5
RHH5304_R3670
186.7
RHH5212_R3583
171.0
RHH5240_R3612
162.5
RHH5269_R3641
172.0
Memory CD4 T-cell Th2 nTPM: 162.5
Samples: 4
Max nTPM: 252.1
Min nTPM: 85.2
RHH5305_R3671
85.2
RHH5213_R3584
201.7
RHH5241_R3613
252.1
RHH5270_R3642
110.8
Naive CD4 T-cell nTPM: 207.2
Samples: 4
Max nTPM: 330.7
Min nTPM: 95.8
RHH5306_R3672
277.4
RHH5214_R3585
124.9
RHH5242_R3614
330.7
RHH5271_R3643
95.8
Naive CD8 T-cell nTPM: 190.4
Samples: 4
Max nTPM: 257.8
Min nTPM: 127.7
RHH5201_R3572
127.7
RHH5229_R3601
200.5
RHH5258_R3630
257.8
RHH5287_R3659
175.6
Non-Vd2 gdTCR nTPM: 45.6
Samples: 4
Max nTPM: 89.0
Min nTPM: 10.1
RHH5235_R3607
10.1
RHH5264_R3636
48.6
RHH5207_R3578
89.0
RHH5299_R3665
34.5
T-reg nTPM: 225.0
Samples: 4
Max nTPM: 268.7
Min nTPM: 196.6
RHH5301_R3667
268.7
RHH5237_R3609
237.9
RHH5266_R3638
196.7
RHH5209_R3580
196.6
Terminal effector memory CD4 T-cell nTPM: 179.0
Samples: 2
Max nTPM: 324.3
Min nTPM: 33.7
RHH5243_R3615
33.7
RHH5272_R3644
324.3
Terminal effector memory CD8 T-cell nTPM: 134.6
Samples: 4
Max nTPM: 259.0
Min nTPM: 17.1
RHH5232_R3604
259.0
RHH5204_R3575
17.1
RHH5261_R3633
69.0
RHH5296_R3662
193.3
Vd2 gdTCR nTPM: 84.6
Samples: 4
Max nTPM: 174.1
Min nTPM: 22.9
RHH5234_R3606
24.6
RHH5206_R3577
22.9
RHH5263_R3635
116.7
RHH5298_R3664
174.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
